Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0809 ATGCAAAGGTCTTGGAATGTTTTTCACTTCATTGCCTCCTCTTTCTCTTGCATTTGTCCATTTTTGCTCCCTTTTTCTTGTCAAGTTTTTTGCCCTTCAAAACTGGAATTGCAAATGGGGAAAAAAGGAAGTTGGTTTTCTGCAGTGAAGAAAGTTTTCAGTCCAGATTCCAAAAAAGATAAGAAAAAACAGAAAAGCCACAAGTCAAAGAACACAAGCAGTGACAAGGAGGGGGAAGTAGCAGAAGCAGTTGCTCTTCCACCAATAGAAGATGTTAAATTAATAGAGGCTGAGAAGGAACAAAGCAAGCATGCTGCTTCTTTGGCTTTTGCCACTGCTGTTGCAGCAGAGGCTGCTGTTGCTGCTGCTCAGGCTGCTGCAGAAGTTGTTCGTCTCACAAGTATGCCACATTACACTGGAAAGACCATGGAAGAGATTGCAGTTATCAAGATTCAGACTGCATTTCGTGGATATATGGCAAGAAGAGCATTGCGTGCCCTGAGAGGTTTGGTGAGGCTGAAAACCGTAGTGCAAGGGCAATGTGTTAAAAGACAAGCTACTAGCACCCTACGAAGCATGCAAACTCTAGCAAGATTACAGTCTCAGATTCGTGAAAGGAGAATTAGAATGTCTGAAGAGAACCAAGCTCTTCAGCGCCAACTGCAGCAGAAACATGAAAAAGAACTTCAGAAGCTGCGTGCTGCTCAGGTTGGAGAAGAATGGGATGACAGTTTGCAGTCAAAGGAGCAAATTGAAGCCAAATTGTTGCACAAGCAAGAAGCAGCTTTCAGAAGAGAGAGAACTTTGGCCTATTCATTCTCACATCAGCAAACATGGAAGGGGTCTTCAAAATCATTAAATCCCACATTCATGGATCCAAACAATCCCCAATGGGGGTGGAGTTGGCTGGAGAGGTGGATGGCTACTCGGCCATGGGATGGCCACAGCACTGTGAATCACAATGATCACGCATCTGTGAAGAGTGCAGGAAGCAAAGCCATGTCAGTAGGAGAAATCGTCAAAGTTTATTCTCTCCAAGACCACCACAACCATGACAAAAGACCTTCCCCTTTTGGCCAAAAGGCAAGAAGACCATCCCCTCACATTTCACCTTCAAAGGCACTATCTGCTAATGGCAAGGCAAGGCCATCAAGCTCAAAGGGTAGTAGTGTCTGGGGTGGAGATGAGGACTCAAGAAGCATGTTCAGCATTCAATCAGAGCGATATCGCCGTCACAGCATTGCAGGATCCTCAGTTAGAGATGATGAGAGCCTTGCAAGCTCCCCTGCCATTCCAAGTTACATGGCACCTACAAGCTCAGCCAAGGCCAGGCTCAAAATCCAAAGGCCTTCACCTGAAAAAGGAGGTGCTGCTGTAAGGAAACGTCTTTCTTTCTCTCCTTCAGCTGCTCCAAGAAGGCATTCTGATCCTCCTAAGGTGGAAATTGTTTCCAGTAATGGAAGGGGAAGGTAG 1473 0.4569 MQRSWNVFHFIASSFSCICPFLLPFSCQVFCPSKLELQMGKKGSWFSAVKKVFSPDSKKDKKKQKSHKSKNTSSDKEGEVAEAVALPPIEDVKLIEAEKEQSKHAASLAFATAVAAEAAVAAAQAAAEVVRLTSMPHYTGKTMEEIAVIKIQTAFRGYMARRALRALRGLVRLKTVVQGQCVKRQATSTLRSMQTLARLQSQIRERRIRMSEENQALQRQLQQKHEKELQKLRAAQVGEEWDDSLQSKEQIEAKLLHKQEAAFRRERTLAYSFSHQQTWKGSSKSLNPTFMDPNNPQWGWSWLERWMATRPWDGHSTVNHNDHASVKSAGSKAMSVGEIVKVYSLQDHHNHDKRPSPFGQKARRPSPHISPSKALSANGKARPSSSKGSSVWGGDEDSRSMFSIQSERYRRHSIAGSSVRDDESLASSPAIPSYMAPTSSAKARLKIQRPSPEKGGAAVRKRLSFSPSAAPRRHSDPPKVEIVSSNGRGR* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0809 490 MobiDBLite consensus disorder prediction 413 490 - -
Pvu4g0809 490 MobiDBLite consensus disorder prediction 57 80 - -
Pvu4g0809 490 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 39 484 - -
Pvu4g0809 490 PANTHER IQ-DOMAIN 5-RELATED 39 484 - -
Pvu4g0809 490 SMART iq_5 143 165 IPR000048 GO:0005515
Pvu4g0809 490 Coils Coil 196 230 - -
Pvu4g0809 490 MobiDBLite consensus disorder prediction 344 398 - -
Pvu4g0809 490 Pfam IQ calmodulin-binding motif 147 165 IPR000048 GO:0005515
Pvu4g0809 490 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Pvu4g0809 490 MobiDBLite consensus disorder prediction 371 393 - -
Pvu4g0809 490 ProSiteProfiles IQ motif profile. 144 172 IPR000048 GO:0005515
Pvu4g0809 490 MobiDBLite consensus disorder prediction 344 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0809 Pvu-Chr4 12451361 12456327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0809 39 489 IQD Protein Family AT5G03040 49.163 8.78e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0809 - - gsj:114412345 671.774