Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0803 CCAAAGAGACTTGGAGCTTTGAACAAGTTCAAATCTGGGGAGTGCAATATTCTCCTTTGTACTGATGTAGCTAGCAGAGGATTGGATATTCCTACTGTAGATATGGTGATTAACTATGATATTCCAACAAATTCCAAAGATTATATACATCGCGTGGGAAGAACTGCTCGTGCAGGGCGCTCTGGAGTTGCTATTTCCCTTGTAAATCAGTATGAACTTGAGTGGTACATTCAAATAGAGAAGCTTATAGGAAAAAAGCTACCAGAGTATCCTTCACAGGAAGAGGAAGTTCTCCTTTTGGAAGAACGTGTTAGTGAAGCCAAAAGATTAGCCACCACGAAAATGAAGGAGACTGGAGGGAAGAAGAAACGGAGGGGTGAAGACGATAATGATGGGGAAGATATCGACAAGTACTTGGGTCTCAAGGATGGAAAATCATCCAAGAAGTTTAGAAGAAAATGA 462 0.4113 PKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPSQEEEVLLLEERVSEAKRLATTKMKETGGKKKRRGEDDNDGEDIDKYLGLKDGKSSKKFRRK* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0803 153 PANTHER BNAC02G41920D PROTEIN 2 135 - -
Pvu4g0803 153 PANTHER RNA HELICASE 2 135 - -
Pvu4g0803 153 Gene3D - 1 148 IPR027417 -
Pvu4g0803 153 Pfam Helicase conserved C-terminal domain 3 59 IPR001650 -
Pvu4g0803 153 MobiDBLite consensus disorder prediction 110 140 - -
Pvu4g0803 153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 102 IPR027417 -
Pvu4g0803 153 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 98 IPR001650 -
Pvu4g0803 153 CDD SF2_C_DEAD 2 68 - -
Pvu4g0803 153 SMART helicmild6 1 59 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0803 Pvu-Chr4 12360272 12361644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0803 2 91 Eukaryotic Initiation Factors Gene Family AT3G19760 42.222 1.39e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0803 K14777 - pvu:PHAVU_004G0748001 278.1