Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0781 ATGGTTTCCTGTGTAATAAAAGGTGAACTCCTAACAACCAAGGAAGCCCAGAGGAGACATCAATACTATGATGAACTGGCATTGCAGGGCCGTTTCTCTTCAGCTCTTTTAGTTGTGAGGGAACATCTTCCTTCTGGAAAGGCATGTCTGAGATTGAATATCGATGCGACAAGAATAGGAAACATTGCACGATTTGTAAATCATTCATGTGATGGTGGTAATTTAAGCACAAAGCTAGTTAGAAGTTCAGGAGCTTTGTTCCCTCGCCTATGCTTCTTTGCTTCAAAAGATATCCCAGTAGATGAAGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAAGGTCAAAGGGGTTGCCATGCTTTTGCAATAGCCCTTCTTGCGTTGGAACATTGCCCTCTGAAGACACTTGA 411 0.4209 MVSCVIKGELLTTKEAQRRHQYYDELALQGRFSSALLVVREHLPSGKACLRLNIDATRIGNIARFVNHSCDGGNLSTKLVRSSGALFPRLCFFASKDIPVDEELTFSYGEIRKRSKGLPCFCNSPSCVGTLPSEDT* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0781 136 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 8 125 - -
Pvu4g0781 136 Gene3D SET domain 2 136 IPR046341 -
Pvu4g0781 136 ProSiteProfiles SET domain profile. 17 109 IPR001214 GO:0005515
Pvu4g0781 136 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 8 125 - -
Pvu4g0781 136 SUPERFAMILY SET domain 4 129 IPR046341 -
Pvu4g0781 136 Pfam SET domain 49 109 IPR001214 GO:0005515
Pvu4g0781 136 ProSiteProfiles Post-SET domain profile. 116 132 IPR003616 -
Pvu4g0781 136 SMART set_7 9 115 IPR001214 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0781 4 131 C2H2 Transcription Factor Family AT2G23740 29.710 7.26e-11 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu4g0781 SET 9.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0781 K11433 - gmx:100786871 244.202