Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0780 ATGGGAAATAGGCTTCATCTTTCGGTGCTTCTGGTTTTGGTAACAGTTCTACTTTCAATCATTCACTCGGAGCAACTGCAATCCTCTCTCTCTCAGACCCTCCTAAGAATTCAACAGCTATTGAACTTTCCAACAGTTTTAAGCTGCTGGGACAACAACACAGACTTTTGCAGCACGGATTCCACATCTTCTCTCACTGTTGTTTGCTATGATGGCACCATAACCCAGCTGCACATAGTTGGTGAAACCAGAGCTCTACTTCTCCCTAAAAATTTCTCAATAAATTCCTTTTTCACAACACTGGTTAGGCTTCCCAGTCTCAAAGTCCTCACTTTGGTTTCTCTTGGCATATGGGGTCCATTGCCTGGTAAGATTGCTCATTTGTCATCACTGGAAATTTTCAATGCGAGTTCAAATTTCCTATATGGTTCCATCCCTTCAGAGTTCTCATCACTGTCACATCTCCAAACACTCATTCTAGACAACAACATGTTTTCTGGCCATCTTCCTGAATGGATCGATTCCTTTCCAGCCTTAACTGTGTTATGTTTGAAACACAACTTGTTCAATGGTTCACTTCCGGATTCGCTCAGTAGCTTGGAGAATATGAGAATTCTTTCACTTTCTCATAACCACTTTTATGGACCAGTGCCTGATTTGCGCCGTTTGGCAAATCTCCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCCCGGTTTCCCCAGCTTGGTGACAAACTGGTTACTCTAGTACTAAGAAACAATAAGTTCAGGTCTAGCATCCCTGATGAAATGAGCTCATGTTATCAACTTGAGACACTTGATATCTCAGCAAACACATTTGTTGGACCATTCCAACTACCACTAATGTCACTTCCTTCTATTACGTATCTGAACATTTCTGGGAACAAGTTAACAGGAATGCTTTTGGAGAATCTGTCTTGCAATCCTGGACTTGAAGCAGTGGATTTATCCTCAAATCTTCTGACTGGGATCTTACCAAAATGTTTAATCTCAAATGCCAATGATAAGACTTTCTTGTATGCTAGAAATTGTCTAGAAGAGACAAATCAAAATCAACACGCACTACCCTTTTGCCACACTGAAGCCATAGCTGTGGGAGTAGTACCTGAGGGAAAGAAGCACAAGCGAGTATCTAAGGCAGTTCTCTCCCTTGGGATAGTTTGTGGTATATTTGGAGGAGTGGCAATTGTTGCACTGCTTTTTTTCATTATCAGAAGGGGAAATGTCCAAAGAAAAATCAAGAATCCTCCATCAAAATTAATATCAGAAAATGCTGCTTCAGGATACACCTCTAAGTTACTCTCTGATACAAGGTATATATCTCAAACAATGAAGTTTGGAACAGTCGATCTGCCTCCTTATCGAGCTTTCTCACTGGATGAGATTGTAGCAGCTACAAACAACTTTGACTCGGTTTGTTTTATGGGTGAAGTTTCTCAGGGAAAGATGCACAGAGGTCAACTAAAGGGCGGTTTACTTGTTGCCATTAGAAGTGTAAAAGTCACCAAAATCTACAGCACTCAAGATTTTATGCATAACATGGAGCAGATATTCAAATACCGGCATCGTCATTTAGTCAGTGTTCTTGGACATTGCTTTGAATGTTATTTGGATGATTCAAGTGTCAGCAGCATATTTATTGTCTTTGAGTATGTACCAAATGGCACACTCAAGAGCTGGATCTCAGATAGGCACTATAGAAAATCCCTGACATGGATGCAACGCATAGAAGCTGCTATTGGAGTAGCAAAGGGCATCCAATATTTGCATACAGGAATTGTACCTGGTGTATATTCAAACAATCTCAAAATCACAGATGTTTTACTTGACAAAAATTTTGTTGCAAAAATCAAAATTTATGACTCGCCTTTGTATTCTCCCATGAGGAAGGTTGGGCAAGGTAATCCTTCTAGAGAATTCAAAAGTCCTAGCGCTAACAAAAATGTAATACAGGAAGACAAGTCTGATGTATATGACTTTGGAGTAATCCTGCTGGAACTCATTCTAGGAAGGACAATAAAGTCGAGGAATGTGGACACTTTAAAAGATCTGTTGCAAGCAAGCATAACAGCTGATGGTGAAGCAAGGAGGAGCATCATAGATCCAGCAGTTCGCAAGGTGTGCTTAGATCAATCATTGAAGACAATGATGGAAATTTGTGTAAGGTGCCTAGTCAAAGAGCCAGCAGAGAGACCCTCTATTGAGGATGTTTTGTGGAATCTGCAGTTTGCAGCTCAAGTCCAAGATGCATGGATAGGAGACTCTCAAAGTGGTAGTGATGGCTCACCTATCTCACCTTTGGCATCTATACGAATGACCTTCCATTAG 2352 0.4073 MGNRLHLSVLLVLVTVLLSIIHSEQLQSSLSQTLLRIQQLLNFPTVLSCWDNNTDFCSTDSTSSLTVVCYDGTITQLHIVGETRALLLPKNFSINSFFTTLVRLPSLKVLTLVSLGIWGPLPGKIAHLSSLEIFNASSNFLYGSIPSEFSSLSHLQTLILDNNMFSGHLPEWIDSFPALTVLCLKHNLFNGSLPDSLSSLENMRILSLSHNHFYGPVPDLRRLANLQVLELDDNAFGPRFPQLGDKLVTLVLRNNKFRSSIPDEMSSCYQLETLDISANTFVGPFQLPLMSLPSITYLNISGNKLTGMLLENLSCNPGLEAVDLSSNLLTGILPKCLISNANDKTFLYARNCLEETNQNQHALPFCHTEAIAVGVVPEGKKHKRVSKAVLSLGIVCGIFGGVAIVALLFFIIRRGNVQRKIKNPPSKLISENAASGYTSKLLSDTRYISQTMKFGTVDLPPYRAFSLDEIVAATNNFDSVCFMGEVSQGKMHRGQLKGGLLVAIRSVKVTKIYSTQDFMHNMEQIFKYRHRHLVSVLGHCFECYLDDSSVSSIFIVFEYVPNGTLKSWISDRHYRKSLTWMQRIEAAIGVAKGIQYLHTGIVPGVYSNNLKITDVLLDKNFVAKIKIYDSPLYSPMRKVGQGNPSREFKSPSANKNVIQEDKSDVYDFGVILLELILGRTIKSRNVDTLKDLLQASITADGEARRSIIDPAVRKVCLDQSLKTMMEICVRCLVKEPAERPSIEDVLWNLQFAAQVQDAWIGDSQSGSDGSPISPLASIRMTFH* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0780 783 Gene3D Transferase(Phosphotransferase) domain 1 560 764 - -
Pvu4g0780 783 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 770 - -
Pvu4g0780 783 Gene3D Ribonuclease Inhibitor 28 241 IPR032675 -
Pvu4g0780 783 ProSiteProfiles Protein kinase domain profile. 477 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0780 783 Gene3D Phosphorylase Kinase; domain 1 439 559 - -
Pvu4g0780 783 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 770 - -
Pvu4g0780 783 SUPERFAMILY L domain-like 77 353 - -
Pvu4g0780 783 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Pvu4g0780 783 Gene3D Ribonuclease Inhibitor 242 360 IPR032675 -
Pvu4g0780 783 Pfam Protein tyrosine and serine/threonine kinase 483 746 IPR001245 GO:0004672|GO:0006468
Pvu4g0780 783 SUPERFAMILY Protein kinase-like (PK-like) 457 751 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0780 Pvu-Chr4 11340008 11348143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0780 43 777 Miscellaneous Gene Families AT3G03770 60.459 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pvu4g0780 PK_Tyr_Ser-Thr 1.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0780 - - gmx:100813207 1306.2