Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0775 ATGTTCCCTTACAGTTCCAACCCCTACCCTTCTTTCCCTTCATCATCTTCTTCATTCCATCCTTTTCCATTCCTCAACCTTGAGAATGCTTCTGCAAGCAACACCCTTCTTCATGATCCACTTTCTGTGCCTTACTTACCAACTCATCACAACCCTCCAAACATCCAAGAAGCACTGAGCAATTTGCCAGTCACAGATCACAACTGTGGTGGTGGAGGTTCTGCAATGACCAAACCTGACCCAAATGGTGGTGGTGGTGCTCCTCACTATGGCCTTTCTTGCTTCCTCACAAAGAAGCCAGCTAAGAAAGACAGACACAGCAAGATTTACACCTCTCAGGGTTTGAGGGACCGGAGGGTGAGGTTATCCATTGAGATTGCTCGCAAGTTCTTTGATCTTCAAGACATGCTAGGGTTTGACAAAGCCAGCAACACCCTTGAGTGGCTCTTCAACAAGTCCAAGAGAGCAATTAAGGAGCTGGCAAGGAGCAAGAACAGCACCAACAGTGAAGAAGGAGCCAAGAGCTTCTCTTCTTCATCTGAGTGTGATGATGACTGTGAAGTGATTTCCGAGATCAGGCAGAAACAACAACTCATCACTGGTGATGCTGCTACTCCACACAACCTACAACATGGGTTAGATTCAAGCGATAATAAGTCACCGACATCGCTGGCTGGAAGGGAGAAGATGAAGTTGAAAAGGACACAGAAGGAACCTGCAAAGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGGGAAAGGACTAGTAACAAGATTATGTGCAATGTTAATTCCAACACAGGGAGGGTGCAACAAGACATGAAGAAAAAGTACCCTGCAATTGAAAATAACCACTCTCAATTCATGCATCAATCAAGGTCACCCACTCACCCTCATCACCTTGTGGGAAGTGAAGCACCTAGAGATGACTTTAACGTTATTGAGGAATCCATAGTGATCAAGAGAAAGTTGAAGCCATCATTGATGTCCTATTCTCATCACCATCACCAAAATCTTATGATCCCTAAGGAACCACCATGTTTCAACAACAACAGTGAGTACCACCCCTTCTCCAATTTATCTCCAAATTGGGATGCTAATGGATCCACTGGCCGTTCCAACTTCTGTGCCATAGCTAGCATGAATCCATCCACAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGGAGTGCACCAATCCACGTTTACACTAG 1218 0.454 MFPYSSNPYPSFPSSSSSFHPFPFLNLENASASNTLLHDPLSVPYLPTHHNPPNIQEALSNLPVTDHNCGGGGSAMTKPDPNGGGGAPHYGLSCFLTKKPAKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKNSTNSEEGAKSFSSSSECDDDCEVISEIRQKQQLITGDAATPHNLQHGLDSSDNKSPTSLAGREKMKLKRTQKEPAKMKESREKARARARERTSNKIMCNVNSNTGRVQQDMKKKYPAIENNHSQFMHQSRSPTHPHHLVGSEAPRDDFNVIEESIVIKRKLKPSLMSYSHHHHQNLMIPKEPPCFNNNSEYHPFSNLSPNWDANGSTGRSNFCAIASMNPSTGLQIFGKSWEECTNPRLH* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0775 405 MobiDBLite consensus disorder prediction 161 181 - -
Pvu4g0775 405 Pfam TCP family transcription factor 101 261 IPR017887 -
Pvu4g0775 405 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 16 404 IPR005333 GO:0003700
Pvu4g0775 405 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 16 404 - -
Pvu4g0775 405 ProSiteProfiles TCP domain profile. 102 160 IPR017887 -
Pvu4g0775 405 MobiDBLite consensus disorder prediction 291 310 - -
Pvu4g0775 405 MobiDBLite consensus disorder prediction 205 223 - -
Pvu4g0775 405 ProSiteProfiles R domain profile. 243 260 IPR017888 -
Pvu4g0775 405 MobiDBLite consensus disorder prediction 224 256 - -
Pvu4g0775 405 MobiDBLite consensus disorder prediction 205 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0775 Pvu-Chr4 11150126 11152343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0775 97 369 TCP Transcription Factor Family AT1G67260 33.813 3.28e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pvu4g0775 TCP 9.8e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0775 - - gmx:100801549 629.402