Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0740 ATGTTCTACCTGGTTGATTTCCCCACACCAAAACAAAAACTGAAGAAACTTGAAGAGTCATTACAAACTATAACCAACCTTGCATGCCAAGTTCCAACTTCATTCATCTCCATTGTTAAATTTCCCTTCATTCTTCATTCTTCACTGCAACAAATTGTTCACTTCATTCACGTCAAAAACTTGAGCATGAGTTCCTACAAGTCATCGCCATCGTCCTCCAAGACCAAAAAGAAGCAAACCACAACACAAGACCATCAGCAACATGAAACGGTTTGGGGAGGGAGGTACCTTGGTGTGAGAAGGAGGCCATGGGGAAGGTATGCGGCGGAAATTCGCGACCCTTCCACCAAGGAGAGGCATTGGTTGGGCACGTTTGATACAGCAGAAGAAGCTGCTCTGGCTTACGACAGAGCGGCGCGTTCCATGCGCGGATCACGTGCCCGAACCAATTTCGTTTATCCGGATACTCCGGCGGGTTCCTCCGTCACCACCATCCTCTCCCCTGATGAACAAACTCAAACCCAAATTCAAATCCATCAGGTCCAAGAAGACCTCTCGTCTTTGCTAAACCCGAACCTGTTTTCACAACCTGACCCAAACCCACCGTTTTCCTTGGGCGGATACTCGGGTGTTACGAACACTCCCACGTTTTCTTCCACCGAAGTTGTTTCATCCGGTGGCTATAACTATAATTATGGTTACACCGAAGGAGGAAGCAACGTGGAAGATTCACATTCACATTCACATTTTAATCTCTTTGATGACGGTGAAACGCAGCTTCCACCGTTGCCACCGGATATCACAAGCTCCATGGCCTATGAAACGGGCCATGGGTTTTATGGAGACGGTGTTGGGTTTTCGGATCCAAGTTTTGGTTTGACTGATACCGGATCGGGTTACCCGTTTCCGGGGTTTGAATCGGGTGATTACGTGGTGCATAGTCCTCTTTTTAGTGCAATGCCACCAGTGTCAGATAACGTGGCAATGGAGGGTTTTGATCTGGGAAACTCTTCTTATTTCTTCCGAAATTAG 1032 0.4729 MFYLVDFPTPKQKLKKLEESLQTITNLACQVPTSFISIVKFPFILHSSLQQIVHFIHVKNLSMSSYKSSPSSSKTKKKQTTTQDHQQHETVWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYPDTPAGSSVTTILSPDEQTQTQIQIHQVQEDLSSLLNPNLFSQPDPNPPFSLGGYSGVTNTPTFSSTEVVSSGGYNYNYGYTEGGSNVEDSHSHSHFNLFDDGETQLPPLPPDITSSMAYETGHGFYGDGVGFSDPSFGLTDTGSGYPFPGFESGDYVVHSPLFSAMPPVSDNVAMEGFDLGNSSYFFRN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0740 343 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 64 341 - -
Pvu4g0740 343 ProSiteProfiles AP2/ERF domain profile. 95 152 IPR001471 GO:0003700|GO:0006355
Pvu4g0740 343 SMART rav1_2 95 158 IPR001471 GO:0003700|GO:0006355
Pvu4g0740 343 SUPERFAMILY DNA-binding domain 95 152 IPR016177 GO:0003677
Pvu4g0740 343 CDD AP2 95 151 IPR001471 GO:0003700|GO:0006355
Pvu4g0740 343 Gene3D AP2/ERF domain 94 153 IPR036955 GO:0003700|GO:0006355
Pvu4g0740 343 MobiDBLite consensus disorder prediction 64 87 - -
Pvu4g0740 343 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 64 341 - -
Pvu4g0740 343 Pfam AP2 domain 96 144 IPR001471 GO:0003700|GO:0006355
Pvu4g0740 343 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Pvu4g0740 343 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0740 Pvu-Chr4 10270274 10271682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0740 71 333 AP2-EREBP Transcription Factor Family AT5G13910 45.833 1.59e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu4g0740 AP2 2.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0740 K09286 - gmx:100815668 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1035 1 22388801 22389496 Pvu4g0740 4 10270274 10271682 PCT