Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0711 ATGGAGAAGAATGATTTTTCAAAAGAGGGTGAAATGCCAATGAATCTCAATATTGAGGACAAAGCTCCACCAACCCCTAAGCAACCTTTTTTCATTGGTGTTGCTGGTGGAACTGCATCTGGAAAAACAACTGTGTGTAATATGATAAACACCCAACTTCGTGATCAACGTGTTGTCCTCATTAGTCAAGACTCCTTTTATCACACATTGAGTGATCAGACACTGCAAAAGGTTAATGAGTATAATTTTGATCATCCTGATGCCTTTGATACGAAGCTTTTGCTTTCAACAATGGAGAAATTAAAATGTGGACAACCTGTTGATATACCAAATTATGATTTCAAAAACCATAAGAGAATTGAATCTGCACGTCAGGTTCATGCTGGAGATATCATAATTTTAGAAGGAATATTAGTCCTTCATGACCAAGGTGTCCGTAATAATTTGAACATGAAGATCTTTGTTGATGAAGATTCTGATGTGCGTCTTTCACGAAGGATGAAACGTCTTGCTATTGATCATGGAAGGAATGTTGAGAATGTGCTAGAACAATATTCCAGATTTGTAAAGCCTAGTTTTGAAGATTTTGTACTGCCAACAAAAAAATATGCTGATATTATTATTCCAAGTGGTGGGGATAATGATGTTGCCATTGACTTAATAGTACAGAACATACGTATGAAGCTTGGCCAACATGATTTGTGCAAAATACATCCCAATATTTTTATTATATTTTCAACATTTCAGATAAAGGGAATGCATACTCTTATCCGTGATGTTAAGGCATCAAAGCATGATTTTGCCTTCTACTCAGATCGTCTAATTAGATTGGTTGTCGAGCATGGATTGGGTCACCTTCCTTTTTCTGAAAAGCAGGTGATAACACCAACAGGATCTGTATATTCTGGTGTTGTTTTCTGTAGTAGGTTGTGTGGAGTTTCAGTAATTAGAAGTGGAGAAAGCATGGAAAATGCATTAAGAGCATGCTGTAAAGGAATCAAGATTGGTAAAATCCTTATTCATGGACATGGCACAAATGGTCGACAG 1047 0.3658 MEKNDFSKEGEMPMNLNIEDKAPPTPKQPFFIGVAGGTASGKTTVCNMINTQLRDQRVVLISQDSFYHTLSDQTLQKVNEYNFDHPDAFDTKLLLSTMEKLKCGQPVDIPNYDFKNHKRIESARQVHAGDIIILEGILVLHDQGVRNNLNMKIFVDEDSDVRLSRRMKRLAIDHGRNVENVLEQYSRFVKPSFEDFVLPTKKYADIIIPSGGDNDVAIDLIVQNIRMKLGQHDLCKIHPNIFIIFSTFQIKGMHTLIRDVKASKHDFAFYSDRLIRLVVEHGLGHLPFSEKQVITPTGSVYSGVVFCSRLCGVSVIRSGESMENALRACCKGIKIGKILIHGHGTNGRQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0711 349 PANTHER URIDINE KINASE 14 347 - -
Pvu4g0711 349 SUPERFAMILY PRTase-like 242 346 IPR029057 -
Pvu4g0711 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 221 IPR027417 -
Pvu4g0711 349 Pfam Phosphoribulokinase / Uridine kinase family 31 217 IPR006083 GO:0005524|GO:0016301
Pvu4g0711 349 CDD UMPK 31 226 IPR000764 -
Pvu4g0711 349 PANTHER URIDINE KINASE-LIKE PROTEIN 5 14 347 - -
Pvu4g0711 349 Gene3D - 232 348 IPR029057 -
Pvu4g0711 349 PRINTS Uridine kinase signature 29 46 - -
Pvu4g0711 349 PRINTS Uridine kinase signature 59 70 - -
Pvu4g0711 349 PRINTS Uridine kinase signature 104 119 - -
Pvu4g0711 349 PRINTS Uridine kinase signature 160 170 - -
Pvu4g0711 349 PRINTS Uridine kinase signature 174 185 - -
Pvu4g0711 349 PRINTS Uridine kinase signature 196 209 - -
Pvu4g0711 349 TIGRFAM udk: uridine kinase 30 228 IPR000764 -
Pvu4g0711 349 Gene3D - 25 231 IPR027417 -
Pvu4g0711 349 MobiDBLite consensus disorder prediction 1 23 - -
Pvu4g0711 349 Pfam Uracil phosphoribosyltransferase 246 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0711 Pvu-Chr4 9423482 9429256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0711 28 349 PRT Gene Family AT1G55810 73.065 1.11e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0711 K00876 - gmx:100803453 538.88