Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0702 ATGGATTGTGAAATCAATAATGATAATAGTGACATTATTTCTATTGATGATGAAATCGATAGGATTTTGGGATTAACCGATGAGTGGAAAAAAGACGATGATGTTGTTTCTATGACTGATGATGATATTAATGAGATGTTTGGCTTGACTGACGATGATGTCGTTAGTATAACTGATGATGATATGAATGAGATGTTTGACATGACCGATGATGAAATCATTTCTACTAGTAATGAGGTTTGTGTTAGAGCAAGTAGGGTTTCTATATCAAATGTTTCACCTTATCAATCTACACCATTTAAGGATAATGGGAAAGCTGCTTCTGAGTTTCCTACACCTACCATTCAACCTATCTCCCCTGATGTGTTTTGTTACAATCACGCTCCTACTCCTTCCAAGGTTTCTACCACTCATGTTTCTGCTATATCACCAAACACTATTACATCCGAACATGTCCCGTCTGGTTGGGTTCAAATGCCTAACTATTCAAATCACTCAACACCTCCCGTATTGAAGTCACATCACAAGCAATATGAGCACTGGACAGAAAATGAACATAGGTTATTTCTTATTGGACTTCAAAATTGTACTCCGGGAAATTGGAAAAAAATTTCAAAAGATTATATTCCATCAAAAACTCCAACTCAAATTGCAAGTCACGCTAAAAAATACAGGCTTCATCAAAATGGCCTAAAGAAAAATAAGAAAAGAAAAAGTATTCACGACATATCCTTAAAAAACACC 744 0.3535 MDCEINNDNSDIISIDDEIDRILGLTDEWKKDDDVVSMTDDDINEMFGLTDDDVVSITDDDMNEMFDMTDDEIISTSNEVCVRASRVSISNVSPYQSTPFKDNGKAASEFPTPTIQPISPDVFCYNHAPTPSKVSTTHVSAISPNTITSEHVPSGWVQMPNYSNHSTPPVLKSHHKQYEHWTENEHRLFLIGLQNCTPGNWKKISKDYIPSKTPTQIASHAKKYRLHQNGLKKNKKRKSIHDISLKNT 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0702 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 173 229 IPR017930 -
Pvu4g0702 248 Gene3D - 178 231 - -
Pvu4g0702 248 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 137 247 IPR043363 -
Pvu4g0702 248 SUPERFAMILY Homeodomain-like 175 229 IPR009057 -
Pvu4g0702 248 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 176 228 IPR006447 GO:0003677
Pvu4g0702 248 ProSiteProfiles SANT domain profile. 181 229 IPR017884 -
Pvu4g0702 248 CDD SANT 181 224 IPR001005 -
Pvu4g0702 248 Pfam Myb-like DNA-binding domain 180 225 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0702 Pvu-Chr4 9244935 9247085 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu4g0702 Myb_DNA-binding 1.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0702 - - pvu:PHAVU_004G065500g 484.567