Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu4g0702 | ATGGATTGTGAAATCAATAATGATAATAGTGACATTATTTCTATTGATGATGAAATCGATAGGATTTTGGGATTAACCGATGAGTGGAAAAAAGACGATGATGTTGTTTCTATGACTGATGATGATATTAATGAGATGTTTGGCTTGACTGACGATGATGTCGTTAGTATAACTGATGATGATATGAATGAGATGTTTGACATGACCGATGATGAAATCATTTCTACTAGTAATGAGGTTTGTGTTAGAGCAAGTAGGGTTTCTATATCAAATGTTTCACCTTATCAATCTACACCATTTAAGGATAATGGGAAAGCTGCTTCTGAGTTTCCTACACCTACCATTCAACCTATCTCCCCTGATGTGTTTTGTTACAATCACGCTCCTACTCCTTCCAAGGTTTCTACCACTCATGTTTCTGCTATATCACCAAACACTATTACATCCGAACATGTCCCGTCTGGTTGGGTTCAAATGCCTAACTATTCAAATCACTCAACACCTCCCGTATTGAAGTCACATCACAAGCAATATGAGCACTGGACAGAAAATGAACATAGGTTATTTCTTATTGGACTTCAAAATTGTACTCCGGGAAATTGGAAAAAAATTTCAAAAGATTATATTCCATCAAAAACTCCAACTCAAATTGCAAGTCACGCTAAAAAATACAGGCTTCATCAAAATGGCCTAAAGAAAAATAAGAAAAGAAAAAGTATTCACGACATATCCTTAAAAAACACC | 744 | 0.3535 | MDCEINNDNSDIISIDDEIDRILGLTDEWKKDDDVVSMTDDDINEMFGLTDDDVVSITDDDMNEMFDMTDDEIISTSNEVCVRASRVSISNVSPYQSTPFKDNGKAASEFPTPTIQPISPDVFCYNHAPTPSKVSTTHVSAISPNTITSEHVPSGWVQMPNYSNHSTPPVLKSHHKQYEHWTENEHRLFLIGLQNCTPGNWKKISKDYIPSKTPTQIASHAKKYRLHQNGLKKNKKRKSIHDISLKNT | 248 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu4g0702 | 248 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 173 | 229 | IPR017930 | - | |
Pvu4g0702 | 248 | Gene3D | - | 178 | 231 | - | - | |
Pvu4g0702 | 248 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 137 | 247 | IPR043363 | - | |
Pvu4g0702 | 248 | SUPERFAMILY | Homeodomain-like | 175 | 229 | IPR009057 | - | |
Pvu4g0702 | 248 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 176 | 228 | IPR006447 | GO:0003677 | |
Pvu4g0702 | 248 | ProSiteProfiles | SANT domain profile. | 181 | 229 | IPR017884 | - | |
Pvu4g0702 | 248 | CDD | SANT | 181 | 224 | IPR001005 | - | |
Pvu4g0702 | 248 | Pfam | Myb-like DNA-binding domain | 180 | 225 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu4g0702 | Pvu-Chr4 | 9244935 | 9247085 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pvu4g0702 | Myb_DNA-binding | 1.4e-07 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu4g0702 | - | - | pvu:PHAVU_004G065500g | 484.567 |