Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0694 ATGCGAATGAGTTGTAACGGTTGTCGTGTGTTGCGAAAAGGATGCAGTGAAGATTGTAGCATAAGGCCGTGTTTGGAATGGATCAAGAACCCAGAATCGCAGGCCAATGCCACAGTTTTTCTTGCTAAGTTCTATGGTCGTGCTGGTCTCTTGAATCTCATCAACGCTGGCCCTCAACAACTTCGACCAGCGATTTTTCGTTCCTTGTTGTACGAGGCATGTGGTCGAATTGTGAACCCGATTTACGGGTCGGTGGGTTTGTTATGGTCGGGAAGCTGGCAGCTTTGTCAAGCCGCCGTGGAAGCCGTTTTGAGAGGCGAGTCCGTCACACCAATCACATCCGAGGTGGCGGCTAATGGGCGGGCGCCGCCACTGAAGGCCTACGACATTCGCCACGTGTCGAAAGATGAGAACTCAGCGAACAGGAGTCAGAAGGGGAAGAGTCGAATCCGGGTTAAGCGAACCGGCGGCGACGTAGTTATCAAACCGAAAGGCTCGGAGGGAATCGGGTTTGGTCCGGTTGAACCGGAGACGAAGCAGACTAGAAGTCATGAGTCGGGACTGAGCCACTTGTCGGAAGCTGCGGCCATTTTGGAAGGAGAGAGCAAAGAGAGTGAGAGTGTGGTGTCGGTGGAAACTGGTAACCTATTTGGTGAGACAAAGATGAGTGATCGAATCGACGAAAGTGGCAATGAAATTGGTTTGGAATTGAGGCTTGGGTTTGAACCGGTTTCACGTGTTCATCACATGGTTCCAATGAAGAAGAGAAGAATAGAAGTGAAAAGTAGCGGTGACTCGATGGAGTTAGGGCTTGAGTCCTCGGCTTGA 828 0.5121 MRMSCNGCRVLRKGCSEDCSIRPCLEWIKNPESQANATVFLAKFYGRAGLLNLINAGPQQLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLRGESVTPITSEVAANGRAPPLKAYDIRHVSKDENSANRSQKGKSRIRVKRTGGDVVIKPKGSEGIGFGPVEPETKQTRSHESGLSHLSEAAAILEGESKESESVVSVETGNLFGETKMSDRIDESGNEIGLELRLGFEPVSRVHHMVPMKKRRIEVKSSGDSMELGLESSA* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0694 275 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 266 - -
Pvu4g0694 275 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Pvu4g0694 275 MobiDBLite consensus disorder prediction 164 185 - -
Pvu4g0694 275 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Pvu4g0694 275 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 266 - -
Pvu4g0694 275 PIRSF AS2 1 169 IPR017414 -
Pvu4g0694 275 PIRSF AS2 164 274 IPR017414 -
Pvu4g0694 275 MobiDBLite consensus disorder prediction 132 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0694 Pvu-Chr4 8994761 8997674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0694 1 260 AS2 family AT3G02550 59.696 3.11e-104 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu4g0694 LOB 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0694 - - gmx:100814175 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0694 4 8994761 8997674 Pvu4g0694 4 8994761 8997674 ECH