LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu4g0693	AAGAGATTCTTATACTGGAATGGAATAGAACCAAGGTTGTGTCTAACAGACACTGCACTCATAAAGGAATTTTTATCAAAGTACAACTCCATATCTGGGAAATCATGGCAACAACAACAAGGTTCCAAACATTTCATAGGGAAAGGGTTGTTGATGGTCAATGGTGAAGATTGGCACCACCAACGTCACTTGGTTGTTCCTGCATTCAAGGGAGAGAGACTTAAGGGCTATGGTGGGTACATGGTGGAGTGCACAAAGGACATGCTTCAGTCATTGAAAAATGCATTAGAAGGTGGAGAAAGTGAGGTGGAGATTGGAGAGTATTTGACTGAACTCACTGCAGATATTATCTCAAGAACTGAGTTTGGCACAAGCTATAAAAAGGGAAAGCAAATATTTTATCTCCTCACACAACTACAGACTCGTGTTGCCCAATCAACTCGCCGTCTTCTCCTTCCTGGAAGCAGGTTTTTCCCAAACAAATACAATAGAGAGATAAAGAGAATGAAGAAGGAGGTGGAGAAACTCTTAAAGGAGATCATAAAGGGTAGGGCAGATTATGTGGAGATGGGGAGAAGCAATTCATGTGGGAATGATTTGTTGGGAATACTCTTGGATGAGATGAAGAAAGAGGGTGGAAGCTTGAATCTTCAACTAGTTATGGATGAATGCAAAACATTTTTCTTTGCTGGACATGAAACCACTGCACTCTTACTTACTTGGACAGTGATGTTGCTAGCTAGCAATCCACATTGGCAAGACAAAGTCAGAGCTGAGGTTAAAGAGATATGCAAAGGGGAAACTCCATCACTTGATCAACTCTCCAAGCTCACTCTGTTACAAATGGTGATCAATGAGTCAATGAGGCTGTATCCTCCTGCAACTGTGCTTCCAAGAATGGTTTTCGAAGACATTGAGTTGGGAGACCTCCACATTCCTAAAGGCTTATCAATTTGGATTCCAGTGTTGGCCATTCATCACAGTGAAGAACTGTGGGGTGAAGATGCAAATGAGTTCAACCCTCAGAGGTTTGCTTCAAAATCATTCACACCTGGTCGCTTCATACCCTTCGCTACTGGCCCTAGAAACTGTGTTGGACAATCATTTGCCATCATGGAAGCCAAGATCATACTCGCCATGTTCATCTCTCAGTTTAGCTTCACCATTTCTGAGAGTTATAGGCATGCACCAGTGGTTGTCCTCACAATTAAACCTAAATATGGTGTTCAAGTTTGTTTGAAGCCTTTAGATGCATAA	1257	0.42	KRFLYWNGIEPRLCLTDTALIKEFLSKYNSISGKSWQQQQGSKHFIGKGLLMVNGEDWHHQRHLVVPAFKGERLKGYGGYMVECTKDMLQSLKNALEGGESEVEIGEYLTELTADIISRTEFGTSYKKGKQIFYLLTQLQTRVAQSTRRLLLPGSRFFPNKYNREIKRMKKEVEKLLKEIIKGRADYVEMGRSNSCGNDLLGILLDEMKKEGGSLNLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPHWQDKVRAEVKEICKGETPSLDQLSKLTLLQMVINESMRLYPPATVLPRMVFEDIELGDLHIPKGLSIWIPVLAIHHSEELWGEDANEFNPQRFASKSFTPGRFIPFATGPRNCVGQSFAIMEAKIILAMFISQFSFTISESYRHAPVVVLTIKPKYGVQVCLKPLDA*	419

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pvu4g0693	418	Coils	Coil	159	186	-	-
Pvu4g0693	418	PANTHER	CYTOCHROME P450 FAMILY MEMBER	4	412	-	-
Pvu4g0693	418	Gene3D	Cytochrome P450	1	417	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu4g0693	418	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	4	412	-	-
Pvu4g0693	418	SUPERFAMILY	Cytochrome P450	3	415	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu4g0693	418	PRINTS	P450 superfamily signature	230	247	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu4g0693	418	PRINTS	P450 superfamily signature	282	293	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu4g0693	418	PRINTS	P450 superfamily signature	355	364	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu4g0693	418	PRINTS	P450 superfamily signature	364	375	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu4g0693	418	PRINTS	E-class P450 group I signature	112	130	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu4g0693	Pvu-Chr4	8975206	8980231	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu4g0693	1	278	Cytochrome P450	AT5G38450	64.664	2.40e-111	330

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu4g0693	K10717		-	gmx:100812567	729.939

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu4g0693	4	8975206	8980231	Pvu8g0057	8	615053	619432	PCT

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