Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0684 ATGATGGAGGAAGTGAAGGAGAAGAACTGGAGAATGGAAGTGGAGGAGAATCTGCAGAGGCTGCAATCTCTTCTGTTGGGCACCGAACAAGCTCTTGCAAGCCAGGACTTCTCCTCCGCTTACGTCCTCGCGCTTCGTCTTCTCGGATTCCTCGACGCCAAATCCCACTCTGACGTCGTCGACGAAGCCTTCCTCCAACCGATTCGCCGCGACGCACTCGCCAAGCTTCACATCGCTCGCAGATCCCTCACTCCTCAATCTGATCGCCAAGCTTTTGAGCAAGCAAAGAAATCTCCAGGATGCATATTTGGCACAACAGGAGATATTGACATTGAGAAGATTCGGAACTCAAAGTACTTCCGTGCACTTGTCAACCAATCTAAAGAAACATATGAGAATAAATTGGTTGATCACCTGGGGAAACAGGACAAAGCAGGCAGCAAAGCCTCGAAGCAAATGGTGCAAACGAAGTTGTCATCCATGTATGGGAAAAACAGCTTGAGGACCAGCAATTGTTCCAAGAGTTCTCTGAACATGAAAAATAATAGCTCCGAGGACTGCAGGATTCTTGGTGGGCCTCAACCTCAAGCCAGCCATACAAAGGGTCCTGGTATCTCTTCTATCTTGCAAGTTGAAGGAGACGAAAGAGCTTTTGGTAACACATTCTCCACTAAACGTGTACACGTGGAAAATAATAGCCTTAGAGTTGGATACTTGAAGTCACCTTCAAGTAAGGAGGAAGTTCACCCTGATGTTTGTGGCAACGGATTTGTTACTGCTAGAGCAAAATTGGAAATGGAAGCAAAGCAGAAGCGAGGAGTAGGTGGTTCACCCAGTGCCTCGGTCTCACCGCAGTGTGATAACAATCCTGCCAACAGGTTGCATGGTGGGAGATCATATGGTGTTTCACGACGTGGCTTCCGTGGTAATTTTGTCCCCCCTATAAAATCCAATGGGAACAATGCTGGAAATATGAGCGCACGAAATGCTGGAAAATACGATGATTCTTTAGATGACTCTACGAAGAAATGTTTGGAAATCCTGTGTGGTCCTGATGGCGAGCTTCCTGAGAAATTGAGGAATTTGGAACCTCGTCTCATTGAACATGTTAGTAACGAGATCATGGATAAAGATCCCAATGTCCGGTGGGATGATATTGCTGGATTGGAGCATGCCAAGAAATGTATTGATGAGATGGTAATATATCCTCTACAACGTCCTGACATATTCATGGGCTGTCGTTCCCCTGGGAGGGGTCTGCTTTTGTTTGGTCCACCAGGAACGGGTAAAACAATGATAGGAAAAGCCATAGCAGGGGAGGCGAAGGCAACCTTCTTTTACATATCTGCAAGTTCGTTAACTAGCAAGTGGATTGGTGAAGGTGAAAAGCTAGTAAGAGCCCTTTTTGGAGTTGCCAGTTGCCGTCAGCCTGCAGTAATTTTTGTTGATGAAATAGATTCTCTCCTGTCTCAGCGTAAATCAGACGGGGAACATGAATCCAGTAGACGGCTAAAGACACAGTTTCTCATTGAAATGGAAGGTTTTGACAGTGGTAGCGAGCAAATTCTGCTTATAGGGGCAACGAATCGTCCCCAAGAGCTTGATGAAAAATTCTATATACCTCCCACCAAAGACTTTATATTCCCCTACCATCCTCAGAGGCAAGAGCTTGGATTGTACGTAACCTTCTACAGAAAGATGAACTATTCAAGCTTTCAAACGAGGAAATGGATATCATATGCAACTTAA 1749 0.4563 MMEEVKEKNWRMEVEENLQRLQSLLLGTEQALASQDFSSAYVLALRLLGFLDAKSHSDVVDEAFLQPIRRDALAKLHIARRSLTPQSDRQAFEQAKKSPGCIFGTTGDIDIEKIRNSKYFRALVNQSKETYENKLVDHLGKQDKAGSKASKQMVQTKLSSMYGKNSLRTSNCSKSSLNMKNNSSEDCRILGGPQPQASHTKGPGISSILQVEGDERAFGNTFSTKRVHVENNSLRVGYLKSPSSKEEVHPDVCGNGFVTARAKLEMEAKQKRGVGGSPSASVSPQCDNNPANRLHGGRSYGVSRRGFRGNFVPPIKSNGNNAGNMSARNAGKYDDSLDDSTKKCLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDKDPNVRWDDIAGLEHAKKCIDEMVIYPLQRPDIFMGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEKFYIPPTKDFIFPYHPQRQELGLYVTFYRKMNYSSFQTRKWISYAT* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0684 582 PANTHER FIDGETIN-LIKE PROTEIN 1 68 537 - -
Pvu4g0684 582 PANTHER AAA DOMAIN-CONTAINING 68 537 - -
Pvu4g0684 582 MobiDBLite consensus disorder prediction 165 189 - -
Pvu4g0684 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 540 IPR027417 -
Pvu4g0684 582 SMART AAA_5 416 554 IPR003593 -
Pvu4g0684 582 Coils Coil 11 31 - -
Pvu4g0684 582 MobiDBLite consensus disorder prediction 165 205 - -
Pvu4g0684 582 Gene3D - 379 538 IPR027417 -
Pvu4g0684 582 CDD AAA 413 536 - -
Pvu4g0684 582 Pfam ATPase family associated with various cellular activities (AAA) 420 538 IPR003959 GO:0005524|GO:0016887
Pvu4g0684 582 MobiDBLite consensus disorder prediction 272 300 - -
Pvu4g0684 582 MobiDBLite consensus disorder prediction 276 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0684 Pvu-Chr4 8759157 8765976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0684 315 541 Calmodulin-binding Proteins AT3G56690 33.913 1.83e-32 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0684 K22766 - gmx:100776024 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0153 8 1303115 1312724 Pvu4g0684 4 8759157 8765976 PCT