Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0679 ATGAATGCATGTAGTTTTCTTGTTTCAAGCCGTGGTGTTGTTGTTTCAGAAGAGCGAGAATTGGAGGAGAATGTTTTCTCAAATGGAAACTATGTTGAGACACCATTTTTGTTTGAACAGGAAATTACGCCTGCACCAGCTGATCCTATTTCCACTGAGATGGTTGAGAAAACTGTCTTTGTTGTGTTCTTCTCTGGGGAGCAAGCAAGAATAAAGATCCTGAAAATTTGTGATGCATTTGGTGCAAACTGTTACCCTATCCCTGAAGATAAAAGTAAGCAGAGGCAAATAACATCAGAGGTATGTATGTCCAGATTAAGAACATTTTTTCCTCTTTGA 339 0.3864 MNACSFLVSSRGVVVSEERELEENVFSNGNYVETPFLFEQEITPAPADPISTEMVEKTVFVVFFSGEQARIKILKICDAFGANCYPIPEDKSKQRQITSEVCMSRLRTFFPL* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0679 112 Pfam V-type ATPase 116kDa subunit family 36 101 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pvu4g0679 112 PANTHER VACUOLAR PROTON ATPASES 48 106 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pvu4g0679 112 PANTHER VACUOLAR PROTON ATPASES 2 46 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pvu4g0679 112 PANTHER VACUOLAR PROTON ATPASE A1 2 46 - -
Pvu4g0679 112 PANTHER VACUOLAR PROTON ATPASE A1 48 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0679 Pvu-Chr4 8620190 8621267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0679 3 106 Primary Pumps ATPases(2) AT2G28520 44.595 5.33e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0679 K02154 - pvu:PHAVU_004G063300g 209.149