Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0627 ATGGAGGGTACTGAACCTGATATAGAAAGGCAGCCCCTGGAAGATGCAGAAAAAGAATGTCCAATATCTGCCGAGGTGGTAATTGATATGGGGCAAGAGAGTCAGACTCGGAACCCCAGTGATTCTTCTGTAGCAGACACTATTAAGGTCATTGACACTGGGAATGAGTGTACAGATCCGAATGTTTGTCCTGTTGACCATAGTCACATGGAAATTAATGATGAATGCCAGACATCAAATATTTTCCATGTTGACAAATTTCATAATGATAATGTCAGTAGTGGACAGCTGTGTGAGAACCCCTGTGCTACATCTGTTAATGTATCAATGCCTAGTACTGATGTGAAAAATGAGAACGAAATATATGTGGCACCAAAAATTGGTATGGAGTTTGAATCAGAAGACAATGCTTACAAATGTTATAGCATGTATGCTGTCCAGAAAGGTTTTAGCGTAAGAAAGGATTTTGTCAACAAAAGTAGGATAAATGGTGCAGTGGTATCCAGAAGATACACATGCCATAGACAGGGTTATCGGCCAAACAAAAATGGTACATTCTTGAGGAAATTTCAGCAGGAAACAAGAACTGGTTGTTTGGCACACATGACTATTGCTCGTCAGCCAAATGGCAAGTTTCAGGTCACTCATTTTGAAACTGAACACAATCATGAGTTTGTAACACCCTGTACTGCTCATATGTTACCGTCACAGAAAAGATTGAGTTTTGCTCAAGCTATTGAAGCAAACTTAACTGTATCCGGGTTAGATGAGGTACCAAAACTGGGAATGGGATTTGACTCAGACGAGCATGCATATGAATTTTATAATACATATGCTGGACGTGTTGGTTTCAGTGTAAGAAAAGATTATGTAAATAGGAGTAAAATTGATGGTGCTGTGGCATCTAGACGATTTACTTGCTTCAGAGAAGGTTTTCGGCAGAAAGACAGACGAGATATGAATCCAAAGAGACCTCGGAAGGATACTAGAATTGGATGTTTGGCCCAACTGGTTATTTCTCGCCAACCTGATGGTAGGTATCATGTTACACACTTTGAAGAAAAGCATAATCATGAACTTGTTGCTGCTTGTAGAGTGCACTTGTTAAGATCACAAAAGGGGCTAACTGCTACTCAAATTGAAAACTTAGTAGATGGGTCCAACTTGCTGCCTACATCAACCTCTGAAACCAATTGCAAGGCTCGTCTTGGTTCTGATCCCATAGGCCGTGATTATAAACTACCTTTCAAATGTACTATCAACATAAAAGAGGGAGAAATTGAAAAGATTAAGCATCACTTCCGAAGCAAGCAATCAAAGAATCCTTCTTTCTTTTACGCATTCCAGCTTGATGCTGATGATCAAATAACTAATATATTTTGGGCTGATACAAAGATGATGGTAGATTACACTGATTTTGGTGATGTTGTTTGTTTTGATAGCAGTTATAAATACTATAAGGACTCCCGGCCATTTGTTCCATTCCTTGGTATAAATAATCACCAGCAAATGACTATCTTTGGGGCTGCACTTCTTTATAACGAATCTGTAGAATCTTTGAAGTGGCTGTTTGTAGTTTTCCTTCAGGCAATGTCTGGAAGAAAGCCAAAGACAATACTGACAGATCTAGATGTTGTAACAGCTGAAGCACTCAATGCCATACTACCCGAAACAAATCATCGAGTTTGTGTATGGCATGTCTATCAAGATGCCCTCAAGCATCTGAGTCATGTTTCTGCTGGATCTGATTCTTTTGTAAATGATTTAAGAAGCTGCCTTTTTCATCACGAGGAGGAGGACTATTTTGTTAATGAATGGAATGCTCTCATGGACAACTATAATCTGTGGGAAAATGAATGGTTACAACAAATATTTGGAAGCAGAGATCGATGGGCCATAGCATATCGAAGACAATTTTTTTGTGCCGACATAGAAAGCATGCTACTGAGAGAAAATCTTAGTGGCAACTTGAAAAGGTACCTAAAGCACGACTCCGACATTCTTCCACTTTTCAAGTATCTTGTTAAAGTTGTTACTGATTGGCACTACAAGGAATTAGATGCCAATTTTGACATGAGCCAGCGTATGCCACCGCTGCTGGGGAATATCATTACGTTAAAGCATGCAAGTGCTCCATACACACCAAAGATATTTGAGTTATTTCAGAAAGAATATGAAGCATGTTTGAATCTAGTGATAAAGCATTGCACTGAAAATGGATCGTTGTATTATTATAAAGTTAGCGTATATGAACAGGCACGAGAGTATTCGGTCACATTTGATTCTTCTAATGAGACAATCAGCTGCTGCTGTATGAAATTTGAGTATGTGGGGATATTATGCTGCCATGCATTAAAAGTTCTTGACTATGTGAACATAAGGATTGTTCCATCTCGCTACATATTAAAGAGATGGACAAAAGATGCTAGAGTTTGA 2436 0.3892 MEGTEPDIERQPLEDAEKECPISAEVVIDMGQESQTRNPSDSSVADTIKVIDTGNECTDPNVCPVDHSHMEINDECQTSNIFHVDKFHNDNVSSGQLCENPCATSVNVSMPSTDVKNENEIYVAPKIGMEFESEDNAYKCYSMYAVQKGFSVRKDFVNKSRINGAVVSRRYTCHRQGYRPNKNGTFLRKFQQETRTGCLAHMTIARQPNGKFQVTHFETEHNHEFVTPCTAHMLPSQKRLSFAQAIEANLTVSGLDEVPKLGMGFDSDEHAYEFYNTYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDRRDMNPKRPRKDTRIGCLAQLVISRQPDGRYHVTHFEEKHNHELVAACRVHLLRSQKGLTATQIENLVDGSNLLPTSTSETNCKARLGSDPIGRDYKLPFKCTINIKEGEIEKIKHHFRSKQSKNPSFFYAFQLDADDQITNIFWADTKMMVDYTDFGDVVCFDSSYKYYKDSRPFVPFLGINNHQQMTIFGAALLYNESVESLKWLFVVFLQAMSGRKPKTILTDLDVVTAEALNAILPETNHRVCVWHVYQDALKHLSHVSAGSDSFVNDLRSCLFHHEEEDYFVNEWNALMDNYNLWENEWLQQIFGSRDRWAIAYRRQFFCADIESMLLRENLSGNLKRYLKHDSDILPLFKYLVKVVTDWHYKELDANFDMSQRMPPLLGNIITLKHASAPYTPKIFELFQKEYEACLNLVIKHCTENGSLYYYKVSVYEQAREYSVTFDSSNETISCCCMKFEYVGILCCHALKVLDYVNIRIVPSRYILKRWTKDARV* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0627 811 MobiDBLite consensus disorder prediction 1 20 - -
Pvu4g0627 811 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 253 811 - -
Pvu4g0627 811 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 90 242 - -
Pvu4g0627 811 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 90 242 IPR031052 GO:0006355
Pvu4g0627 811 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 253 811 IPR031052 GO:0006355
Pvu4g0627 811 SMART 26again6 767 794 IPR006564 GO:0008270
Pvu4g0627 811 Pfam SWIM zinc finger 745 791 IPR007527 GO:0008270
Pvu4g0627 811 Pfam MULE transposase domain 476 569 IPR018289 -
Pvu4g0627 811 Pfam FAR1 DNA-binding domain 141 226 IPR004330 -
Pvu4g0627 811 Pfam FAR1 DNA-binding domain 273 361 IPR004330 -
Pvu4g0627 811 ProSiteProfiles Zinc finger SWIM-type profile. 756 792 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0627 Pvu-Chr4 7757109 7762505 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu4g0627 MULE 6.1e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0627 K17604 - gmx:102659753 1433.31