Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0602 ATGGAGAAGATGGAAAAGATGGCAACTACATTCCCACCTGTCAGAGATCCAAGGTCCGGTTTCAATCCCTTTTCCGGAACCTTCCACAGCCTCAAACCACCACTTATTCTCCCTCCTCCCAACGCCACCATCTCCGCCGCTTCCTACATCCTCTTCCTCCGTCGCAACTCGCACTTTCCGGACTCCTCTACCGCCGTTATCGACTCAACCTCCGGCCACCGTCTCTCCTACCAAGAACTCATCCACCGCGCTGAGAACCTAGCCGCCAACCTCGCCACAGTTCTCAAACTATCAAAATCTCACACCGCGCTCGTTCTTTCCCCAAACATCCTCCAAGTTCCGATCCTCTGTTTCGCGCTCCTCTCCCTCGGTGTGGTCATCTCCCCCGCGAACCCTCTCTCCACACGCCTCGAGCTCACGCGCCTCTTCCACCTCAGCAAACCTGCGATCGTCTTCGCAGTGACTTCAATCGCGGAAAAAACACGTGAGTTTCATGTCCGCACGGTCCTCCTCGACTCGCCCGAGTTCGACTCCCTCACTCGGACTAAGATTCAGCCTCTGAGTCCAATCCCCTCCACCACGCCGGTGACTCAGTCCGACGTGGCAGCGATTCTGTACTCTTCCGGCACGACGGGGAAGGTGAAGGGCGTTATGCTTACACACCGCAACCTAACTGCGATAGCCGCGGGATACGACACGGTCCGCACGAAGCGCGCAGAACCCGCGGTGTTCCTCTATACGGTGCCGTATTTCCACGTGTACGGTTTCACGTTCAGCCTAGGGGCGATGGTGCTGTCGGAGACGGTGGTGATAATGGAGAGGTTCAGTTTGAGGGGAATGCTGAGCGCGGCGGAGAGGTTCCGAGCGACGCACATTACGGTGGTGCCGGTACTAGTGGTGGCTTTGACGAAAGACAGAGTGACAGACGAATACGAGTTGACGTCGTTGGAAGGGATCGTGTGCGGTGGAGCTCCACTGAGGAAGGAAATCCACGAGGCTTTCAAAACCAAATTCCCCAAGGTCCATATCATGCAGGGATACGGTTTAACTGAGTGTGCAGTTACCCGAACCGTTCCGGAGGAGGCTAATCAGGTGGGAACAGCAGGTAGACTGAAACCAGACATAGAAGCCAAAATTGTGAACCCACAAACAGGGAAACTCATGCTTCCTGGTCAAAAGGGAGAACTATGGATCAAAGGACCTTATGTTATGAAAGGTTATGTTGATGAGCCGGAAGCAACTTCAGCCACTTTGGTGAATGGATGGTTAAGAACTGGAGATCTTTGTTATTTTGATAATGATGGTTTCTTGTATGTTGTAGATAGGTTAAAAGAGTTGATCAAATACAAGGGCTACCAGGTTGCTCCGGCAGAGCTAGAAGAGTTGCTCCTATCTCACCCAGACATAACTGATGCTGCTGTTATTCCATACCCTGATGATGAAGCAGGCGAAGTGCCCATGGCGTTTGTTGTAAGACAACCTCAAAGTTCTCTTGGCGCCGCAGAAGTTGTCGATTTTGTTGCCAAACAGGTTACACCGTACAAGAAAATAAGGCGTGTAGCATTTGTTGATTCCATACCCAAGAATGCTTCAGGGAAGATACTAAGAAAGGATCTATGTAAAATTGCACTCTCTAAGTTATAA 1644 0.5164 MEKMEKMATTFPPVRDPRSGFNPFSGTFHSLKPPLILPPPNATISAASYILFLRRNSHFPDSSTAVIDSTSGHRLSYQELIHRAENLAANLATVLKLSKSHTALVLSPNILQVPILCFALLSLGVVISPANPLSTRLELTRLFHLSKPAIVFAVTSIAEKTREFHVRTVLLDSPEFDSLTRTKIQPLSPIPSTTPVTQSDVAAILYSSGTTGKVKGVMLTHRNLTAIAAGYDTVRTKRAEPAVFLYTVPYFHVYGFTFSLGAMVLSETVVIMERFSLRGMLSAAERFRATHITVVPVLVVALTKDRVTDEYELTSLEGIVCGGAPLRKEIHEAFKTKFPKVHIMQGYGLTECAVTRTVPEEANQVGTAGRLKPDIEAKIVNPQTGKLMLPGQKGELWIKGPYVMKGYVDEPEATSATLVNGWLRTGDLCYFDNDGFLYVVDRLKELIKYKGYQVAPAELEELLLSHPDITDAAVIPYPDDEAGEVPMAFVVRQPQSSLGAAEVVDFVAKQVTPYKKIRRVAFVDSIPKNASGKILRKDLCKIALSKL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0602 547 Pfam AMP-binding enzyme 55 449 IPR000873 -
Pvu4g0602 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 16 541 - -
Pvu4g0602 547 ProSitePatterns Putative AMP-binding domain signature. 204 215 IPR020845 -
Pvu4g0602 547 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Pvu4g0602 547 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 16 541 - -
Pvu4g0602 547 Gene3D - 39 444 IPR042099 -
Pvu4g0602 547 SUPERFAMILY Acetyl-CoA synthetase-like 54 545 - -
Pvu4g0602 547 CDD 4CL 56 539 - -
Pvu4g0602 547 Gene3D - 445 545 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0602 Pvu-Chr4 7290808 7301161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0602 16 544 Monolignol Biosynthesis Gene Families AT5G63380 48.901 1.45e-179 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0602 - - gmx:100784234 837.795