Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0599 ATGAATAAACCCTTCTTTTCCAATTGCAATATCAAACCTACAAAGATGAAGACTTTCTCCTCAATTCAACAACCCCACCATTTTCGCTGTACAAGATTTTTCTCTCACACTACCACAAGGACTCAACTTTCTTTTCCTACGAAGGTCTTCTTTTGCCAGGCAATATCTGGAACAGATGGGTCATTGCATTCAAATGTGGTGTCTCCTACACTATTAGCAGGAGAAAAGGAAGAAGCAAAGGCTGTGTTGACCTTGTTTTTGAAGAAACAAGGTTTGAGCAATGCGATTGCTGCTAGAACCATCCACAAGTCAGATCTTTTTGTTGATCACCTTATCTCAAAGCTTCATTCTAAACACAAATCTTGGTATCTCACAGGGAGAGAGCTTACAACTATGGAGATCAGGGATGTGCTTTTCCCTTATCTTGAATCACTTTTTGAAGAGCATGGAGACATTCTAGTGGACGTGGTAGAAAACTATCCAAATCCACCTGTTAAGGATAAATCAGCTGTGTCAGTTCCTCTTTCTAATCCAGTGTTAGACTCTAAGAAGCTTAAAGCTTTGTCCCGAGTGAGCGAGATAGACTGGAATGGTGGCATTCTTCGCCCTCATATTGCATATTTGATGGAACTTGGTATGGATATAGACCAGATTAGGAGTATCACCCGAAGATTCCCATCTTTTGCCTACTATAGCTTGGAAGGTAAAATTAAGCCGGTTGTCGAGTTTCTTCTTGAACTTGGAGTGCCAAAAGAGCGCATTCCCTCTATCCTCTCTAAAAGGCCTCAAATATGTGGAATTAGTCTATCAGAAAATCTTAAGCCTACCATGAAGTTCTTTGAATCTTTGGGTGTTGACAAGAGGCAATGGCCGAAGGTGATCTATCGCTTTCCAGCCATGCTAACTTATAGCAGGCCTAAAGTAATGGAAAACATAGATTTTCTCCTTGAATTGGGACTCTCAGAAGAGAATATAGGGAAGATTTTAACTCGGTGCCCCAATATTGTCAGTTACAGTGTAGAGGACAATCTTCGACCCACAGCTAAGTACTTCCGTTCTTTGGGGGTAGATGTTAGCATTCTTCTATTCAGATGCCCGCAGAATTTTGGTCTTAGCATTGAGACCAATCTAAAGCCTGTAACAGAATTTTTCTTGGGAAGGGGATACACTTTGGAAGAAATTGGAACCATGATTTCAAGATATGGAGCCTTGTATACATTCAGCTTGACTGAAAATTTGATTCCAAAATGGGATTTCTTTTTGACCACGGGTTACCCGAAGTCTGAGCTGGTCAAGTTCCCTCAATATTTTGGATACCGTTTTGAGGAAAGGATTAAACCTAGATTTGCAATTATGAAAAAATCAGGAGTGAAGTTACTGCTGAACCAGGTTCTTTCACTGTCAAGCAGTAACTTTGACGAGGCCTTGAAAAAGAAAATGAAGAAAAAGCTAGAAGGTTAG 1461 0.4038 MNKPFFSNCNIKPTKMKTFSSIQQPHHFRCTRFFSHTTTRTQLSFPTKVFFCQAISGTDGSLHSNVVSPTLLAGEKEEAKAVLTLFLKKQGLSNAIAARTIHKSDLFVDHLISKLHSKHKSWYLTGRELTTMEIRDVLFPYLESLFEEHGDILVDVVENYPNPPVKDKSAVSVPLSNPVLDSKKLKALSRVSEIDWNGGILRPHIAYLMELGMDIDQIRSITRRFPSFAYYSLEGKIKPVVEFLLELGVPKERIPSILSKRPQICGISLSENLKPTMKFFESLGVDKRQWPKVIYRFPAMLTYSRPKVMENIDFLLELGLSEENIGKILTRCPNIVSYSVEDNLRPTAKYFRSLGVDVSILLFRCPQNFGLSIETNLKPVTEFFLGRGYTLEEIGTMISRYGALYTFSLTENLIPKWDFFLTTGYPKSELVKFPQYFGYRFEERIKPRFAIMKKSGVKLLLNQVLSLSSSNFDEALKKKMKKKLEG* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0599 486 Pfam mTERF 201 316 IPR003690 GO:0003690|GO:0006355
Pvu4g0599 486 Pfam mTERF 205 385 IPR003690 GO:0003690|GO:0006355
Pvu4g0599 486 Pfam mTERF 307 472 IPR003690 GO:0003690|GO:0006355
Pvu4g0599 486 Gene3D Transcription termination factor 3, mitochondrial 265 485 IPR038538 -
Pvu4g0599 486 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 36 483 - -
Pvu4g0599 486 SMART mt_12 291 321 IPR003690 GO:0003690|GO:0006355
Pvu4g0599 486 SMART mt_12 255 286 IPR003690 GO:0003690|GO:0006355
Pvu4g0599 486 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Pvu4g0599 486 SMART mt_12 395 426 IPR003690 GO:0003690|GO:0006355
Pvu4g0599 486 SMART mt_12 326 357 IPR003690 GO:0003690|GO:0006355
Pvu4g0599 486 SMART mt_12 427 458 IPR003690 GO:0003690|GO:0006355
Pvu4g0599 486 SMART mt_12 359 390 IPR003690 GO:0003690|GO:0006355
Pvu4g0599 486 PANTHER CGI-12 PROTEIN-RELATED 36 483 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0599 Pvu-Chr4 7239979 7242882 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu4g0599 mTERF 9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0599 K15032 - gmx:100781900 812.757