Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0598 ATGTTCCAAGGTGGTACAATGAGACATTTTTTTTCCCTTTATCTTGTGGTTCTTTCATGGTTCTTTTTCATCCCAAACACTCAGGAATTACAAGCTGCTCATACACAAGCCTTGTTGCAGTTAAGAGTTTATCTAGAGTATCCTTCCTCTTTACAAATTTTGGACTATTACCAGGGGGACCTGTGCTGGCTCTCTCCATCTGCAAACCTGAGCATTAAATGTGAAGATGATGAGGTAACTGAGCTTAAAATTACGGGTGAAAAATCTTTGAAGCCACCATGGTTCAATGGATATGCAGTTCCTAATCAGACTCTATCCATGAATTTCTCCATTGATTCCTTTTTCATCACTTTGACAAGGTTAACCAGCTTAAGGGTTCTTAGCTTGGTGTCCTTGGGGATTTGGGGGCCACTTCCTGATAAGATTCACAGTTTCACTTTGCTTCAAGTTTTGGACTTGAGTTCCAATTTCTTATTTGGAGACATTCCACCAAAAATATCCACAATGGTAAAGCTTCATGCACTGACCCTTGATGACAATTATTTTAACACCACTATGCCCGATTCGTTTGATTCTCTGTCCAATCTGAATATCTTGAGTGTGAAGAGCAATGGTTTAAAGGGTTCATTCCCCTCCTCACTGGGAAAAATTAAGACACTTGAAGTTATTTCCTTGTCCCACAATGAGTTGTCTGGTGACTTGCCTGGTCTCAGTTCTCTCACTGGCCTACATGTTCTGGATTTAAGAGAAAACCATTTAGAATCTGAACTACCATTGTTGCCTAAATCTGTGGTCACTGTGCTGCTTAGCAATAACTCGTTTTCAGGAGAGATACCTAATCAGTTTCATGAACTGAATCAGCTTCAACATCTAGATCTTTCTTCAAATTACCTCAGTAAGACACCACCATCTACCTTGTTTTCTCTACCAGAAATAAGTTATTTGAATCTTGCGAGTAATGTGCTAAGTGGGACCCTCCCAGACAAACTTAACTGTGGTAGCAAACTTGGGTTTGTGGACATTTCTCGTAACAAGTTAAGCGGTGGACTTCCTTCTTGCTTGGCGAATACATCTGATAGCAGAGTTGTTAGATATGCTGGAAACTGTTTATCTGTTGATTCTCAGAACCAGTATAGAGGGTCCTATTGTAAAGAATCTTCCTCTGGATGGAAAAGCTTCAAGACATGGGAAGTAGCTGTAGTAATGGTCATCATTGTTGTACTTGTTCTTGTGCTTTTGGGGTCGAGCGTCTTCTTATGGAAAAAGTATCATTCCACAAAGACAACTGGGCAAGATAACTCCTCAATAGGAGTTCCGTCAGAGATCCTAGCAAATGCCAGATTTATTTCTCAAACAATGAAGCTAGGGACACAAACTATTCCAACCTGTCGGCAATTTTCAATAGAGGAATTGAAGGAAGCCACAAAAAACTTTGACTTGTCAACTTATATTGGTCAAGGCTCCATTGGCAAGATGTACAAAGGTAAACTGGATAATGGATCCTACGTGGCAATACGGTCTTTGCCTCTGTCAAAGAAATGCTCAATTCAAACTCTCAGAGCTAAACTGGATTTACTCTCAAAACTTCATCATCCAAATTTGGTTAGCCTTTTGGGTCATTGTATTGATGGTGGAGGACAAGATGATTCCAATTCCCACAAACTTCATCTTGTATATGAGTATGTGCCAAATGGGAATTATCATGCCCATCTGTCAGAATTTTCTGTAGGGAAGGCACTTAAGTGGTCTGATAGATTGGCAATTTTAATTGGAGTTGCCAAGGCAGTGCATTTCTTACATACTGGTGTTATACCTGGCTGCTTTAGTAACCTACTAAAAACAAAGAATGTCTTGCTTGATGAACACTGCATTCCAAAACTAAGTGACTATGGTATGTCCATTATCACAGAAGAAATTGAAAAGTTTGAGGCAAAGGGTGAGAAATCAAAGCCATGCCTAAGGACAAAAGCAGATGATGATGTTTATAATTTTGGATTCATATTGTTCGAATCACTTGTTGGACCTATAGCATGCGAAAAAGGTGAAACATTTTTCCTAAATGAAAAGGCATCCTTTGGCAGTCAAGATGGTAGAAGAAAGATTGTGGATCCTACAGTGTTGACCACTTGCTCTCAAGAGTCATTATCAATTGCAATATCAATAACAACCAAATGCATATCTCCAGAATCTTCCTTTCGTCCCTCTTTTGAGGATGTCTTATGGAACTTACAGTATGCAGCTCAAGTGCAAGCCACAGCAGATGCAGACCAGAAATCAGATTAA 2283 0.396 MFQGGTMRHFFSLYLVVLSWFFFIPNTQELQAAHTQALLQLRVYLEYPSSLQILDYYQGDLCWLSPSANLSIKCEDDEVTELKITGEKSLKPPWFNGYAVPNQTLSMNFSIDSFFITLTRLTSLRVLSLVSLGIWGPLPDKIHSFTLLQVLDLSSNFLFGDIPPKISTMVKLHALTLDDNYFNTTMPDSFDSLSNLNILSVKSNGLKGSFPSSLGKIKTLEVISLSHNELSGDLPGLSSLTGLHVLDLRENHLESELPLLPKSVVTVLLSNNSFSGEIPNQFHELNQLQHLDLSSNYLSKTPPSTLFSLPEISYLNLASNVLSGTLPDKLNCGSKLGFVDISRNKLSGGLPSCLANTSDSRVVRYAGNCLSVDSQNQYRGSYCKESSSGWKSFKTWEVAVVMVIIVVLVLVLLGSSVFLWKKYHSTKTTGQDNSSIGVPSEILANARFISQTMKLGTQTIPTCRQFSIEELKEATKNFDLSTYIGQGSIGKMYKGKLDNGSYVAIRSLPLSKKCSIQTLRAKLDLLSKLHHPNLVSLLGHCIDGGGQDDSNSHKLHLVYEYVPNGNYHAHLSEFSVGKALKWSDRLAILIGVAKAVHFLHTGVIPGCFSNLLKTKNVLLDEHCIPKLSDYGMSIITEEIEKFEAKGEKSKPCLRTKADDDVYNFGFILFESLVGPIACEKGETFFLNEKASFGSQDGRRKIVDPTVLTTCSQESLSIAISITTKCISPESSFRPSFEDVLWNLQYAAQVQATADADQKSD* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0598 760 ProSiteProfiles Protein kinase domain profile. 478 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0598 760 SUPERFAMILY L domain-like 88 371 - -
Pvu4g0598 760 Gene3D Phosphorylase Kinase; domain 1 449 561 - -
Pvu4g0598 760 Gene3D Ribonuclease Inhibitor 31 262 IPR032675 -
Pvu4g0598 760 Gene3D Ribonuclease Inhibitor 263 376 IPR032675 -
Pvu4g0598 760 ProSiteProfiles Leucine-rich repeat profile. 287 308 IPR001611 GO:0005515
Pvu4g0598 760 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Pvu4g0598 760 Pfam Protein tyrosine and serine/threonine kinase 480 740 IPR001245 GO:0004672|GO:0006468
Pvu4g0598 760 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Pvu4g0598 760 Pfam Leucine rich repeat 265 322 IPR001611 GO:0005515
Pvu4g0598 760 Gene3D Transferase(Phosphotransferase) domain 1 562 760 - -
Pvu4g0598 760 PANTHER OS07G0166700 PROTEIN 5 760 IPR045272 GO:0004714|GO:0006468
Pvu4g0598 760 SUPERFAMILY Protein kinase-like (PK-like) 458 743 IPR011009 -
Pvu4g0598 760 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 5 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0598 Pvu-Chr4 7204776 7209953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0598 7 688 Miscellaneous Gene Families AT5G14210 54.000 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pvu4g0598 PK_Tyr_Ser-Thr 3.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0598 - - gmx:100799183 1264.21