Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0580 ATGCCTAAAATGATGATCACTACAATCCTAGTCTTCATCTTCGTCCTTCCGTTCACATTCGCTGAGCTACGCGTTGGCTTCTACACCTCAACTTGTCCAAGAGCAGAGAGAATTGTACGTGAAGTTGTGGAAAGCCATTTCAGCAAAGATGAATCCATTGTTGGAGGCTTGCTTCGTTTGCACTTCCATGATTGCTTTGTGAGAGGCTGTGATGGTTCTGTACTAATAGATCCGACAAGAACCAGAACATCGGAGAAGAAGGCAGGGCCGAACCTAACTGCTCGTGGATTTGAGATCATTGATGATGCAAAAACGTGGTTGGAACAAGAGTGCCCTTCAACAGTTTCATGTGCAGACATCTTAGCACTAGCCACAAGAGATTCAGTGGAACTGGCAGGAGGGAAGTGGTACAGCATCCCCACAGGAAGGAAAGATGGTCTCTTGTCTGATCCTGCACTGGTCAACCTTCCATCGCCGTCACTCTCTGTGTCAGATGCTCTTCCATTTTTCACCGCAAAAGGGTTGACATTGGAGGACATGGTGACCCTTTTGGGAGGACACACCGTTGGTTTTGCCCATTGCAGTATGTTTCAAAACAGGCTTGAAGGAAATGGTGATCCCTCAATGGACCCTGCATTGGAACAAACACTGGTGCAAATTTGTGAGTTCAAAAAGAGACCTAACAGTGACCCTCTTGCGTTTTTGGACCAAAACACATCCTTTTTATTTGACAATCAATTTTACCACCAAATGATTCTAAGAAGAGGGGTTCTTCACATTGATCAGCAATTGGCTTTGGACCCACTGTCAAGAAACATGGTGCAGAATTTTGCAGCAAATGATAGTTTCTTCCAAGAGAAGTTTGCAAAGGCCATGATAAAGCTGGGGAGCATTGGTGTTTTGGATTCAACTGATGGTGACATTAGAAAGAATTGTAGGGCATTTAATATTCCTTTGTAG 960 0.4437 MPKMMITTILVFIFVLPFTFAELRVGFYTSTCPRAERIVREVVESHFSKDESIVGGLLRLHFHDCFVRGCDGSVLIDPTRTRTSEKKAGPNLTARGFEIIDDAKTWLEQECPSTVSCADILALATRDSVELAGGKWYSIPTGRKDGLLSDPALVNLPSPSLSVSDALPFFTAKGLTLEDMVTLLGGHTVGFAHCSMFQNRLEGNGDPSMDPALEQTLVQICEFKKRPNSDPLAFLDQNTSFLFDNQFYHQMILRRGVLHIDQQLALDPLSRNMVQNFAANDSFFQEKFAKAMIKLGSIGVLDSTDGDIRKNCRAFNIPL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0580 319 Gene3D Peroxidase, domain 2 157 295 - -
Pvu4g0580 319 SUPERFAMILY Heme-dependent peroxidases 22 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PANTHER PEROXIDASE 44-RELATED 13 314 - -
Pvu4g0580 319 CDD secretory_peroxidase 22 315 IPR033905 GO:0004601|GO:0042744
Pvu4g0580 319 ProSiteProfiles Plant heme peroxidase family profile. 22 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Pvu4g0580 319 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Pvu4g0580 319 PANTHER PEROXIDASE 25-RELATED 13 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 Gene3D - 26 316 - -
Pvu4g0580 319 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g0580 319 Pfam Peroxidase 39 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0580 Pvu-Chr4 6914346 6916118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0580 10 316 Peroxidase AT4G26010 52.597 2.32e-117 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0580 K00430 - gmx:100816459 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1107 1 27305060 27307105 Pvu4g0580 4 6914346 6916118 PCT