Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0575 ATGGGATCTCAAGGTGGGGCAGTTCAAGAGCCAAATACTACTACTAGTACTACCCCTTTGGTTAGGCAAGGATCCTTGTATAATCTGACCCTAGATGAGTTGCATAACCAGCTTGGGAATTTGGGGAAGCCACTTGGCAGCATGAATCTTGATGAGTTGCTGAAGAGTGTGTGGATTGCTGAAGTTCGTGGTGAGGCCCCGGGCTTGGACTTTGGTGGTGGTGATGCTGACATGCAAGATGGTCCTGCTGCTTCTGCTTCCTTTCTGAATCCTCAGGGAAGTCTAACTTTGTCAAGGGATCTAAGCAGGAAAACTGTTGATGAGGTGTGGAGAGACATGCAACTGAAGAAGGGTACTTGTAGGGATAAGAAAACCCAGGAAAGACAGCCTACAATGGGTGAGATGACTCTGGAGGACTTCTTGGTGAAGGCTGGAGTGGTTCCTGATTCAGATGGGGTTTCCTCACAGCATGGCCATTGGATGCAATACCAGCACCCTTCAGTGCAGCATCAGAATATGGTTGTTGGGGGTTATGTGGCTGGGCATGCCATTCAGCAGCCTTTCCACACTACGTTGAATCTAGTTTTGGATGCAGCATACTCTGAACCGGCTTCTTTAGTAGGAGCATTATCGGATACACAAACTCCCAGTCGAAAAAGGCTTGCCTCTGGTGATCTGGTGGAGAGAACTGTGGAGAGGAGGCACAAGAGAATGATTAAAAATAGAGAATCTGCTGCTCGATCTCGGGCAAGAAGACAGGCATACACACAAGAACTGGAGATTAAAGTTAAGCAATTAGAAGTGGAGAATGAAAGGCTTAGAAGACTGAATGAGATCGAGAAGGCATTGCCATCTGAGCCACCACCTGAGCCTAAGCAACAGCTACGCAGAACGAGTTCAGCCATCTTTTGA 912 0.477 MGSQGGAVQEPNTTTSTTPLVRQGSLYNLTLDELHNQLGNLGKPLGSMNLDELLKSVWIAEVRGEAPGLDFGGGDADMQDGPAASASFLNPQGSLTLSRDLSRKTVDEVWRDMQLKKGTCRDKKTQERQPTMGEMTLEDFLVKAGVVPDSDGVSSQHGHWMQYQHPSVQHQNMVVGGYVAGHAIQQPFHTTLNLVLDAAYSEPASLVGALSDTQTPSRKRLASGDLVERTVERRHKRMIKNRESAARSRARRQAYTQELEIKVKQLEVENERLRRLNEIEKALPSEPPPEPKQQLRRTSSAIF* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0575 303 MobiDBLite consensus disorder prediction 70 91 - -
Pvu4g0575 303 PANTHER BZIP TRANSCRIPTION FACTOR 2 301 - -
Pvu4g0575 303 SMART brlzneu 229 297 IPR004827 GO:0003700|GO:0006355
Pvu4g0575 303 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 236 251 IPR004827 GO:0003700|GO:0006355
Pvu4g0575 303 SUPERFAMILY Leucine zipper domain 233 278 IPR046347 GO:0003700|GO:0006355
Pvu4g0575 303 MobiDBLite consensus disorder prediction 1 21 - -
Pvu4g0575 303 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 301 IPR043452 GO:0003700|GO:0045893
Pvu4g0575 303 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 231 275 IPR004827 GO:0003700|GO:0006355
Pvu4g0575 303 Coils Coil 256 283 - -
Pvu4g0575 303 Pfam bZIP transcription factor 233 278 IPR004827 GO:0003700|GO:0006355
Pvu4g0575 303 MobiDBLite consensus disorder prediction 279 303 - -
Pvu4g0575 303 Gene3D - 231 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0575 Pvu-Chr4 6809527 6813046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0575 1 303 bZIP Transcription Factor Family AT3G56850 53.226 7.91e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu4g0575 bZIP_1 2.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0575 K14432 - gmx:100816805 432.18