Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0572 ATGAAAGAAGTCTTGGAAAAACTAGAATATCTTTCAAGGCAAAAGGATGTTCTTGCTTTGAAAGAGGGTAGTTATTCTAGAGTTAGATCAGGTCGTAAAGTGTCACAGAAATTACAATCAACTTTTTTCGTTGTTGAAAGTGTTATTTATGGTAGAGATGCTGAAAAAGATATAATCATTAATTGGCTCAAATTGGAAACCGATAATCGAAACCAACCCTCAATACTTATACTTTCCATTGTGGGCATGGGTGGGTTGGGTAAGACCACACTTGCCCAACATGTCTACAATGACCCAAAGATCGAGGATGCAAAATTGGATATCAAAGCTTGGGTATGTGTTTCAGATTATTTTCATGTTTTTACTGTGACAAGAACAATTATTGAGGCATTCACCGGTGAAAAAGATAATAGTAGGAATCTAGAAATGGTTTACAAAAGATTGGAAGAAAAATTGTTAGGAAGGAAATTTTTTCTTGTTTTGGATGATGTTTGGAACGAAAAACCAGAAGAATGGGAAGCTGTGCGAACTCCTCTTACCTATGGGGCTCCAGGAAGTAGAATTCTTGTCACAACTTGTGGTGAGAAAGTTGCTTCTATCATGAGGTCTAAAGTGCTTTGCCTAAAGCAATTAGGAGAGGATGAATGTTGGAATGTTTTTGAAAATCACGCATTGAAAGATGGTGATCTTGAATTGAATGAAGAGCTAAAGGAGATTGATAAAAGGATAGTTGAGAAGTGCGTGGGATTACCTCTAGCTTTGAAAACAATTGGATGTCTTTTACGCACAAAGTCATCCATTTCAGACTTGAAAAACATATTGGTAAGTGACATATGGGACTTACTAAAAGAAGACAATGAAATTATCCCTGCTCTATATTTGAGCTATCATCACCTTCCTTCTCATCTTAAAAGGTGTTTTGCTTATTGGGCTTTATTCCCCAAAGATTATGAGTTTATGAAGGAGGAGTTAATTTTGTTGTCTTTCTTTCAACAAGGCACTGAAACAAGGAGGTCTTTCTTTGAACAAAGCACTAAAAGGTGTTTCGTCATGCATGACCTTCTAAATGATTTGGCAAAATATGTTTATGGAGATTTTTGTTTCAGGTTGAAATTTGATAAAGGTCAATGTATAGCGAAAACAACCCGTTATTTTTCATTTGAATTCAATGACGTCAAATGTTTTAATGATTTCGGGAGTTTAACTGATGCTAAAAGACTTTGTTCATTTCTTCCCATTATAGAAATTTGGGGAACTTACATTTACTATGGATGGTATTTCAAGATTTCGATACATGATTTGTTCTTCAAAAATAAGTTTTTACGCGTCTTATCTCTCCATGGTTGTTATGCCCTTAAAGATGTCCCAAATTCTGTAGGCGGTCTTAAACATCTCCTTTCATTGGACCTTTCGTCTACTAGGATACAAAAGCTACCAAATTCAATAGGTTTGCTTTATAACTTGCTAATACTGAAGTTGAACTACTATTTAAGTCTCGAGGAGTTGCCCTCAAATTTGCATAAACTCAAAAAATTATGTTGCCTGAATTTATAG 1554 0.3514 MKEVLEKLEYLSRQKDVLALKEGSYSRVRSGRKVSQKLQSTFFVVESVIYGRDAEKDIIINWLKLETDNRNQPSILILSIVGMGGLGKTTLAQHVYNDPKIEDAKLDIKAWVCVSDYFHVFTVTRTIIEAFTGEKDNSRNLEMVYKRLEEKLLGRKFFLVLDDVWNEKPEEWEAVRTPLTYGAPGSRILVTTCGEKVASIMRSKVLCLKQLGEDECWNVFENHALKDGDLELNEELKEIDKRIVEKCVGLPLALKTIGCLLRTKSSISDLKNILVSDIWDLLKEDNEIIPALYLSYHHLPSHLKRCFAYWALFPKDYEFMKEELILLSFFQQGTETRRSFFEQSTKRCFVMHDLLNDLAKYVYGDFCFRLKFDKGQCIAKTTRYFSFEFNDVKCFNDFGSLTDAKRLCSFLPIIEIWGTYIYYGWYFKISIHDLFFKNKFLRVLSLHGCYALKDVPNSVGGLKHLLSLDLSSTRIQKLPNSIGLLYNLLILKLNYYLSLEELPSNLHKLKKLCCLNL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0572 517 Gene3D - 210 294 IPR042197 -
Pvu4g0572 517 ProSiteProfiles Leucine-rich repeat profile. 464 485 IPR001611 GO:0005515
Pvu4g0572 517 Pfam NB-ARC domain 57 273 IPR002182 GO:0043531
Pvu4g0572 517 SUPERFAMILY L domain-like 350 517 - -
Pvu4g0572 517 Gene3D Ribonuclease Inhibitor 394 517 IPR032675 -
Pvu4g0572 517 PRINTS Disease resistance protein signature 77 92 - -
Pvu4g0572 517 PRINTS Disease resistance protein signature 151 165 - -
Pvu4g0572 517 PRINTS Disease resistance protein signature 247 261 - -
Pvu4g0572 517 PRINTS Disease resistance protein signature 460 476 - -
Pvu4g0572 517 PANTHER DISEASE RESISTANCE PROTEIN RP 1 516 IPR044974 GO:0006952
Pvu4g0572 517 Gene3D - 295 361 IPR036388 -
Pvu4g0572 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 309 IPR027417 -
Pvu4g0572 517 PANTHER OS05G0414200 PROTEIN 1 516 - -
Pvu4g0572 517 Gene3D - 31 209 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0572 Pvu-Chr4 6781333 6782971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0572 63 362 WRKY Transcription Factor Family AT5G45050 25.559 2.45e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0572 - - pvu:PHAVU_004G053000g 1003.05