Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0565 ATGCCACAGAAGCGGAAGAAGCGTCCTCCTCCCCCCATTGAAGATCCTCCAACTGCTTCCTCCTCCGAATCCGAGGAAGGTGATGACCGACCGCGTTCCTCTCAACCGCATGCAGCAGCAGCAGCACCACCACCAGTAGCAGCAGCACAGGTTTCCTCATCTGAAGATGAAGACGATTCTTCCGAAGAAGACAAGAAGCAACGTTCCACTCTCCCTGCTTCTGCAAACCCTCCCTCCAACGCTCACCCCAAATCCTCCTTCTCAGAATCTGACACTGATTCCGAACCTACCCGAGCCAAATCCAAATCCAAACCCAAACCAAAATCCAAGCCTACGGACCAGCTCCAGCCCCAGGACCAGGCCCAGCGTTCCTCCGCGCAGGTGAAACCTGTATCGAAGCGCTCCATCCACAAAACTGACCCGAAACGCTTGAAGAAGAAACGAGCCGACGCTCCTTCTTCCTCCGTTGCTAATGACGCGACGGAGGAGGACGGGAATAAGTCCGGCAGCCAGGCGAAGTTGTTCCAGAGGATCTGGAGCCCTGAAGACGAGGTCGGCATTCTTAAGGGCATCCTTGAGTTCATCTCAATGACAGGGCAAGACCCTTACAGATACGCCGACGCTTTCCACAGCTTCATTAAGAAGTCACTCCACGTGGAGTTTTCCAGCTTGCAGCTGAAGGAGAAGATCCGACGGATGAAGAAGAGGTGCAAGACTCATTTGGAGAGACAGGCAGAGGGGAAGGAGCCTCGGTTGTTGAAACCTCACGACCAGACCCTGTTTGAATTCTCCAAGAAGATTTGGATTGATTGGCCCAACGGGCTGGTGGAAAAGCCCAAGTTTAATGGGAAAGGCAGGAAACCAAAGAAGAAGGAATCTGCCACCACAAGTGTGCCAAAAGCCAAGGACAACGTTTTGCCGCAGCCATCAGCGCCGCTGCTGGCGTTGCCGGCGCCTGGAGAGTATGATAGTGGGGACGTGAGTTTGCTTTACCGCAAGATTTCTTGTTTTGAAGAGCTGGACGCGGATGAGATGAAGAGAGGACTTACTTTAATTGGAGAATCCAAGAGGAAGGAATTGGAGAGAAGGTGGAACATGTTGGTACATTCTGAGATGGAACTACTTGCGAATCGCTCTCTACTGATTGGGGAGCAGATTAAGTTGATATCTGAAGCCCTTCAGTCATCGAGCAATTAG 1197 0.5221 MPQKRKKRPPPPIEDPPTASSSESEEGDDRPRSSQPHAAAAAPPPVAAAQVSSSEDEDDSSEEDKKQRSTLPASANPPSNAHPKSSFSESDTDSEPTRAKSKSKPKPKSKPTDQLQPQDQAQRSSAQVKPVSKRSIHKTDPKRLKKKRADAPSSSVANDATEEDGNKSGSQAKLFQRIWSPEDEVGILKGILEFISMTGQDPYRYADAFHSFIKKSLHVEFSSLQLKEKIRRMKKRCKTHLERQAEGKEPRLLKPHDQTLFEFSKKIWIDWPNGLVEKPKFNGKGRKPKKKESATTSVPKAKDNVLPQPSAPLLALPAPGEYDSGDVSLLYRKISCFEELDADEMKRGLTLIGESKRKELERRWNMLVHSEMELLANRSLLIGEQIKLISEALQSSSN* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0565 398 MobiDBLite consensus disorder prediction 154 171 - -
Pvu4g0565 398 PANTHER BNAANNG10740D PROTEIN-RELATED 37 395 IPR007592 GO:0006355
Pvu4g0565 398 MobiDBLite consensus disorder prediction 88 109 - -
Pvu4g0565 398 MobiDBLite consensus disorder prediction 110 132 - -
Pvu4g0565 398 Pfam Protein of unknown function, DUF573 175 268 IPR007592 GO:0006355
Pvu4g0565 398 PANTHER STOREKEEPER PROTEIN 37 395 - -
Pvu4g0565 398 MobiDBLite consensus disorder prediction 279 310 - -
Pvu4g0565 398 MobiDBLite consensus disorder prediction 70 87 - -
Pvu4g0565 398 MobiDBLite consensus disorder prediction 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0565 Pvu-Chr4 6682604 6684576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0565 12 392 GeBP Transcription Factor Family AT1G61730 27.792 2.86e-22 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pvu4g0565 DUF573 4.9e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0565 - - vun:114182157 484.182