Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0504 ATGGCACAGAGATCCTTCTCTTCCTCCAGGAATCCATGGCATTATGATGTCTTTCTAAATTTTAGAGGTGAAGATACTCGTTCACAGTTTGCATATAATCTTTACAATTCGTTGCGCCAAAAGGGGATTGTTACTTTCTTCGACGATGATGGTCTTAGAAGAGGGGAAGATATTACACCTTCTCTCTTCAAAGCTATTCAAAATTCAATGATTTCCATCGTTGTCTTCTCCAAAAACTATGCATCTTCAACCTATTGCTTAAACGAACTTGTAAAGATACTTGAATGCGCGAAGGAAGAAGGCCGATCGATCTATCCAATATTTTATGAGGTGGATCCATCACAAGTTCGACATCAGACTGGAACTTATGCAGAAGCATTGTCAAAACACGAAGCTAGGTTCCACACTGACGCTGACAATGAGAAGGCACAAAAATGGAGGAAGGCTTTACATGAAGCAGCTAATCTATCCGGCTGGCATTTCCAACATGGGTCTCAACAACCAGAATATGAGTTTATCAGAAAGATTGTTGAAGAGATATCTGAAAAGATAAATTACATCCCTTTACATGTTGCTGATAATCCAATTGGGCTGGAGTATGCAGTGCAAGGAGTGAAATCTCTCCTTGGAGATGGGTCTGATGTCAACATGGTAGGAATTTATGGTATCGGGGGTATAGGTAAAACCACGATTGCTCGTGCTGTGTATAATTGTCTTTTTTGGCATTTTCAAGGTTCCTGTTTTCTACCTGACATTAGAGAAAATACAATTAATAAGCATGGGATTGTGCGACTCCAAGAAATACTACTTTCTGAAACACTCAAAGAAGAAGATATTAAAGTGAGAGATGTCAATAGAGGAATCCAGATAATAAAAAGGAGACTTCAACAGAAGAAGGTCCTTTTAGTTCTTGATGATGTTGACAAATTACAGCAGTTAAAGGTACTTGCAGGGGGACATGATTGGTTTGGCTCTGGAAGTACAATCATCATCACCACAAGAGACAAGTACTTGCTAGATGCTCATGGGGTGGTAAACCTATATGAGGCTAAGCCTTTAAATGTTGAAAAAGCTATCGAATTGTTTAACTGGCATGCCTTCAAAAAGGGAAAAGTTGGTCCAGCTTATACGAATATTTCCAACCGTGCAGTTTCTTATGCATGCGGACTTCCGTTGGCTCTGGAAGTTATAGGATCTCACTTATTTGGAAAAAGTTTAGAACAGTGCAGTTCTGCATTAGATAAATATGAAAGTATTCCTCATGAGAAGATTCATGAAATACTTAAAGTAAGCTATGATGGTTTGGAAGAAAATGAGAAGGGAATTTTCCTGGACATTGCTTGTTTCTTCAATACCTGTGAACTGGGCAATGTCACACCAATTCTAGAAGCTCATGGTTTTTATGTAGAAGATGGTTTGAGAGTGTTGGTTGACAGATCTCTCATAAAGATTGATTCTTCTGGTTTTGTGAGAATGCATGATCTAATTCTAGACACAGGTAGAGAAATTGTAAGGCAGGAATCAACACTTGAGCCAGGCAGACGTAGTAGATTATGGTTTAACGAGGACATTGTTCATGTTTTGGAAGAAAATACGGGATCTGATAAAATAGAATTCATAAAGCTTGAAGGGCACAACAACATAGAAGTGCAATGGAATGGAAAGGCATTCAGGGAAATGAAGAACTTGAGAATTTTGATCATTGAAGATTCAACCTTTTCTACTGGCCCTAAGCATCTACCAAATAGCCTGAGAGTGCTAGACTGGAGTTGCTATCCTTCACCATCTTTACCTTCTGATTTCAATCCCAAACGTTTTGAGATACTCCTTATGCCTGAAAGTTGCCTTCAGATATTCAAACCAGAAAAGATGTTGGGATCATTGTCTATAATAAACCTTGAAGATTGCAAGTTCTTAACTGATCTACCGAGCCTACGAGAAGCACCACTCTTAACAACTCTGCGTCTAGATAAATGCTCTAATTTGGTTAACATTGATGAATCAATTGGGTTTCTTGATAAGCTTTGCTTATTGAGTGCTCAAGAATGCACCAAGCTGAAAACTCTTGCACCCTGCATCATGCTGACATCTCTTGAAACTTTGGATCTTCGGAGGTGCGAAAGTCTTGAGAGTTTCCCAGAAGTATTGGGAAAGATGGAGAAAATAAGGAAAATATATTTAGACGGCACAAATATAGAGAAATTGCCATTTTCAATTAGAAATTTTGTTGGGCTTGAACTGCTGTCCTTGAAGGGTTGCCGAAGACTTTATCAGCTACCAGATAGTATAAGCATGATACGGGAAGTTAAGGTGTTAGTGGGTTATGGGCATGGAACGTATCAAAATTTTGAAGAGTTGAGCTCAGAGGTGTCTGCAAGTGCCATGCTTATTGACGCTTAG 2400 0.39 MAQRSFSSSRNPWHYDVFLNFRGEDTRSQFAYNLYNSLRQKGIVTFFDDDGLRRGEDITPSLFKAIQNSMISIVVFSKNYASSTYCLNELVKILECAKEEGRSIYPIFYEVDPSQVRHQTGTYAEALSKHEARFHTDADNEKAQKWRKALHEAANLSGWHFQHGSQQPEYEFIRKIVEEISEKINYIPLHVADNPIGLEYAVQGVKSLLGDGSDVNMVGIYGIGGIGKTTIARAVYNCLFWHFQGSCFLPDIRENTINKHGIVRLQEILLSETLKEEDIKVRDVNRGIQIIKRRLQQKKVLLVLDDVDKLQQLKVLAGGHDWFGSGSTIIITTRDKYLLDAHGVVNLYEAKPLNVEKAIELFNWHAFKKGKVGPAYTNISNRAVSYACGLPLALEVIGSHLFGKSLEQCSSALDKYESIPHEKIHEILKVSYDGLEENEKGIFLDIACFFNTCELGNVTPILEAHGFYVEDGLRVLVDRSLIKIDSSGFVRMHDLILDTGREIVRQESTLEPGRRSRLWFNEDIVHVLEENTGSDKIEFIKLEGHNNIEVQWNGKAFREMKNLRILIIEDSTFSTGPKHLPNSLRVLDWSCYPSPSLPSDFNPKRFEILLMPESCLQIFKPEKMLGSLSIINLEDCKFLTDLPSLREAPLLTTLRLDKCSNLVNIDESIGFLDKLCLLSAQECTKLKTLAPCIMLTSLETLDLRRCESLESFPEVLGKMEKIRKIYLDGTNIEKLPFSIRNFVGLELLSLKGCRRLYQLPDSISMIREVKVLVGYGHGTYQNFEELSSEVSASAMLIDA* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0504 799 Gene3D Ribonuclease Inhibitor 519 794 IPR032675 -
Pvu4g0504 799 Gene3D - 12 183 IPR035897 -
Pvu4g0504 799 SUPERFAMILY "Winged helix" DNA-binding domain 423 529 IPR036390 -
Pvu4g0504 799 Pfam TIR domain 15 185 IPR000157 GO:0007165
Pvu4g0504 799 PRINTS Disease resistance protein signature 217 232 - -
Pvu4g0504 799 PRINTS Disease resistance protein signature 294 308 - -
Pvu4g0504 799 PRINTS Disease resistance protein signature 387 401 - -
Pvu4g0504 799 PRINTS Disease resistance protein signature 693 709 - -
Pvu4g0504 799 Gene3D - 353 436 IPR042197 -
Pvu4g0504 799 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Pvu4g0504 799 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 446 IPR027417 -
Pvu4g0504 799 SMART till_3 14 156 IPR000157 GO:0007165
Pvu4g0504 799 ProSiteProfiles TIR domain profile. 13 184 IPR000157 GO:0007165
Pvu4g0504 799 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 770 IPR044974 GO:0006952
Pvu4g0504 799 Gene3D - 184 345 IPR027417 -
Pvu4g0504 799 SUPERFAMILY L domain-like 542 765 - -
Pvu4g0504 799 PANTHER ARCHAEAL ATPASE 25 770 - -
Pvu4g0504 799 Pfam NB-ARC domain 200 430 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0504 Pvu-Chr4 5308631 5312203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0504 6 787 WRKY Transcription Factor Family AT4G12020 32.878 2.38e-98 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0504 - - gmx:100797941 1126.31