Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0498 ATGCAAACTGGGGAAGTCTCAGCCCTCAACTATTTACTCCCTTCAAACCCTTCTCCCTTCCCTCCTAACAACTACACAACCATCCAAAACAACATTCCCACATTTCAGTTCCCAAGATTCTCAACCCAATTATATGGCCACAACACTCCCTATGATTTCAGCCCTCAATCATCATGCATCAGCAGCAACTCCACTTCTGATGAGGCAGATGAGCAACAGCTGAGTCTCATCAACGAGAGGAAGCACAGGAGGATGATATCAAACCGAGAATCCGCACGCAGGTCACGGATGAGGAAGCAGAAGCACCTTGATGAGCTTTGGTCTCAGGTGATGTGGCTCAGGAATGAGAACCACCAACTCATAGAGAAGCTCAACCATGTCTCAGAGAGCCATGACCAAGTGCTCCAAGAGAATGCTCAGCTGAAAGAGGAAGCCTCAGAACTTCGCCAAATGATGAGGGACATGCAGATACACAGCCCTTGCCCCTCCTTCACCCCTTTTCAAGATGATGTTCCTTGCACCTCACCATATCTCAGATCCGATTCTTCAAACCAATCCAACTCATGTAACAACATAGACCTCCTTGGCTGA 591 0.4788 MQTGEVSALNYLLPSNPSPFPPNNYTTIQNNIPTFQFPRFSTQLYGHNTPYDFSPQSSCISSNSTSDEADEQQLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVMWLRNENHQLIEKLNHVSESHDQVLQENAQLKEEASELRQMMRDMQIHSPCPSFTPFQDDVPCTSPYLRSDSSNQSNSCNNIDLLG* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0498 196 Coils Coil 124 158 - -
Pvu4g0498 196 SMART brlzneu 76 140 IPR004827 GO:0003700|GO:0006355
Pvu4g0498 196 PANTHER BZIP TRANSCRIPTION FACTOR 1 186 - -
Pvu4g0498 196 CDD bZIP_plant_GBF1 81 132 IPR045314 GO:0003700|GO:0006355
Pvu4g0498 196 Pfam bZIP transcription factor 80 138 IPR004827 GO:0003700|GO:0006355
Pvu4g0498 196 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 186 IPR044521 -
Pvu4g0498 196 SUPERFAMILY Leucine zipper domain 80 130 IPR046347 GO:0003700|GO:0006355
Pvu4g0498 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 78 141 IPR004827 GO:0003700|GO:0006355
Pvu4g0498 196 MobiDBLite consensus disorder prediction 175 196 - -
Pvu4g0498 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 83 98 IPR004827 GO:0003700|GO:0006355
Pvu4g0498 196 Gene3D - 78 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0498 Pvu-Chr4 5216268 5217323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0498 2 171 bZIP Transcription Factor Family AT3G30530 61.714 1.86e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu4g0498 bZIP_1 3.4e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0498 - - aprc:113867865 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0498 4 5216268 5217323 Pvu8g0244 8 2031704 2032567 PCT