Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0491 ATGACAATTGTAAACCTAGAACCCAAGGCACAGAAGACAAAATCAAGGAGGAACAAAGCAGTTTCTGATGAAAAGGCACCTTTGTTACCTAAGACTCATGAAGCTGATTCTTCAGGGTTTGATGATTTCAACGGTGCTTCGTTTTCTGGGGCTGTTTTCAACTTGTCCACCACAGTTATTGGTGCTGGGATCATGGGGTTGCCTGCATGTGTGAAAAAATTGGGGATGGTGCCTGGTCTTATTGCTATAGCCTTAATTGCTTTGTTGACAGAGAAGTCAATTGGGTTCATGATTAGGATTTCCAGGGAAGGAAATCTTTCTTCTTATGCGAATCTAGTGGGGGATACATTTGGCAAATTTGGAAAAGCCCTGGTGCAGATATGTGTGGTAATCAACAACATTGGAATGCTGATCATTTACATGATTATTATCGGTGATGTGATTTCTGGAACATCTTCTGGCGGAGTTCATCATTCTGGTTTACTTGAAGAATGGTTTGGAGTTCACTTGTGGACAGGACGTTCATTTGTTCTTCTTGTTATAACACTTTTTGTGTTTGCACCTTTGTCCTGCTTCAAGCGAATTGATTCGTTGAGATACACTTCTGCATTATCATTTGGTTTAGCAGTTGTCTTTCTCGTCATTGCTGTGGGAATTTCAGTTTTTAAGATTGCTATTGGAGGCATTGGGATGCCTAGATTATTCCCTATCATCACTGATGTATCCTCAGTTTTTGAACTGTTCACAGTAACTCCTGTGGTTGTCACAGCCTATCTGTGCCACTTCAATGTACACCCCATAGACAATGAACTCGAGGACTCGTCACAGATACAAGGGGTTGTGCGTGCTTCCCTTACTCTATGTGCTTCAGTGTACTTACTGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACTCTTGTTGACGTGCTTGCAAATTTTGACACTGATCTTGGGATTCCTTTTGGTTCTGTGCTTAATGATGCTGTTCGTGCTACCTATGCTGCACATCTTGTGCTTGTATTTCCAGTTGTCTTCTATGCAGTGCGGATCAACCTTGATGGGCTCCTATTTCCATCATCTAGGCCTTTGGTTCTAGATAACGTCAGATTTGCAATAATTTCTACGGGACTTATTGTTTTTTCCTTTTGGGGAGCAAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCAGCATGTTTAGCATTCATATTTCCAGCTGCCATCATCCTTAAGGATCGGTACAAAATTGCAACTAGAAGGGACAAGATTCTATCTGTCATTATGATAGTCCTTGCAGTCTTTGCAAATGTTGTGGCTATATACAGTGATGCATATGCCTTGATCAAGAGTAGTCTTAGCTCAATGCGATGGATTTCTTGA 1404 0.4145 MTIVNLEPKAQKTKSRRNKAVSDEKAPLLPKTHEADSSGFDDFNGASFSGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLIAIALIALLTEKSIGFMIRISREGNLSSYANLVGDTFGKFGKALVQICVVINNIGMLIIYMIIIGDVISGTSSGGVHHSGLLEEWFGVHLWTGRSFVLLVITLFVFAPLSCFKRIDSLRYTSALSFGLAVVFLVIAVGISVFKIAIGGIGMPRLFPIITDVSSVFELFTVTPVVVTAYLCHFNVHPIDNELEDSSQIQGVVRASLTLCASVYLLTSFFGFLLFGEGTLVDVLANFDTDLGIPFGSVLNDAVRATYAAHLVLVFPVVFYAVRINLDGLLFPSSRPLVLDNVRFAIISTGLIVFSFWGANFIPSIWDIFQFTGATAAACLAFIFPAAIILKDRYKIATRRDKILSVIMIVLAVFANVVAIYSDAYALIKSSLSSMRWIS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0491 467 MobiDBLite consensus disorder prediction 10 33 - -
Pvu4g0491 467 MobiDBLite consensus disorder prediction 1 33 - -
Pvu4g0491 467 Pfam Transmembrane amino acid transporter protein 46 449 IPR013057 -
Pvu4g0491 467 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 459 - -
Pvu4g0491 467 PANTHER AMINO ACID TRANSPORTER 7 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0491 Pvu-Chr4 5108176 5112927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0491 16 459 Amino Acid or Auxin Permease AAAP Family AT3G30390 63.004 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0491 K14207 - gmx:100785277 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0491 4 5108176 5112927 Pvu8g0247 8 2060889 2064482 PCT