Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0480 ATTAAGTTCTTAATTAATTTTACCTTACAAAACTTCACGATAACCTTGGGACAAGGATCATTTGGGACAGTTTATAAAGCAACAATGCCTACTGGGGAGGTTGTAGCAGTGAAGGTGCTTGCACCTAATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTATTTCTGCTAGGAAGACTGCATCACCGGAATCTTGTGAATTTGGTTGGATATTGTGTAGATAAAGGGCAACGCATACTGGTTTATCAGTATATGAGTCATGGAAGTTTAGCAAATCTTTTATATGGTGAAGAAAAAGTATTGAGTTGGGATGAAAGGCTGCAAATTGTTCTTGATATTTCACATGGAATAGAATACCTTCATGAAGGAGCAATCCCACCTGTCATACATCGCGATTTAAAGTCTGCCAACATATTGCTAGATCACTCAAAGAGAGCTAAGGTTGCTGATTTTGGACTCTCAAAAGAAGAGATCTTTGATGGCCGGAATTCTGGTCTCAAAGGTACATATGGCTACATGGATCCTGAATACATTTCCACAAGCAAGTTAACAACGAAGAGTGACATATACAGTTTTGGTATCATAGTTTTTGAGCTCATCACTGCCATCCACCCTCATCAAAATTTGATGGAGTATGTTAACCTTGCTGCAATGGATCATGATGGTATAGATGAGATTCTTGACAAGAAAATAGTGGGAAAATGCAATCTTGAAGAAGTGAGGCAGCTTGCAAAGATTGGACACAAATGCTTGCACAAATCACCTAACATATGGTCCTAA 783 0.387 IKFLINFTLQNFTITLGQGSFGTVYKATMPTGEVVAVKVLAPNSKQGEKEFQTEVFLLGRLHHRNLVNLVGYCVDKGQRILVYQYMSHGSLANLLYGEEKVLSWDERLQIVLDISHGIEYLHEGAIPPVIHRDLKSANILLDHSKRAKVADFGLSKEEIFDGRNSGLKGTYGYMDPEYISTSKLTTKSDIYSFGIIVFELITAIHPHQNLMEYVNLAAMDHDGIDEILDKKIVGKCNLEEVRQLAKIGHKCLHKSPNIWS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0480 260 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 8 256 - -
Pvu4g0480 260 Pfam Protein kinase domain 15 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0480 260 ProSiteProfiles Protein kinase domain profile. 10 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0480 260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Pvu4g0480 260 Gene3D Transferase(Phosphotransferase) domain 1 87 258 - -
Pvu4g0480 260 SUPERFAMILY Protein kinase-like (PK-like) 15 257 IPR011009 -
Pvu4g0480 260 PANTHER OS01G0750732 PROTEIN 8 256 - -
Pvu4g0480 260 ProSitePatterns Protein kinases ATP-binding region signature. 16 38 IPR017441 GO:0005524
Pvu4g0480 260 Gene3D Phosphorylase Kinase; domain 1 16 86 - -
Pvu4g0480 260 SMART serkin_6 10 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0480 Pvu-Chr4 4990662 4992984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0480 11 254 Receptor kinase-like Gene Family AT1G67720 44.922 3.04e-65 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pvu4g0480 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0480 - - pvu:PHAVU_004G044200g 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0480 4 4990662 4992984 Pvu8g0258 8 2136230 2140612 PCT