Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0473 ATGGTTCGCCAAACTGATTTAGTTATCATTGGTGTTTCTGTTGGTTTGGCACTTGGAATTCTGATATCTTGCCTCATATTTTTCGGCATAAGATGGTACAAGAAACGTGCTGCTCATCTTAGATTATCTGCAAATGAGTCTAGTATAACAACTCTTCCAATACGAACAAATGGATTGGGAACAAGTACCGACTTCAGTGCATCACTTGATAGTTCCATAGCCACATCGAGGTCAGAAAATCTCAAGAAAAATTCCCATTTCACTTGGTGGAATCATCAAAACAGAGATCGGTTTACTTCTGCATCAGGCATTCTGAAGTATTCATACAGAGAAATTCAAAAGGCCACACAAAACTTCACGACAACCTTGGGACAAGGATCATTTGGGACAGTTTATAAAGCAACAATGCCTACTGGGGAGGTTGTAGCAGTGAAGGTCCTTGCACCTAATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTATTTCTGCTAGGAAGACTGCATCACCGGAATCTTGTGAATTTGGTTGGATATTGTGTAGATAAAGGGCAACGCATACTGGTTTATCAGTATATGAGTCATGGAAGTTTAGCAAATCTTTTATATGGTGAAGAAAAAGTATTGAGTTGGGATGAAAGGCTGCAAATTGTTCTTGATATTTCACATGGAATAGAATACCTTCATGAAGGAGCAATCCCACCTGTCATACATCGCGATTTAAAGTCTGCCAACATATTGCTAGATCACTCAAAGAGAGCTAAGGTTGCTGATTTTGGACTCTCAAAAGAAGAGATCTTTGATGGCCGGAATTCTGGTCTCAAAGGTACATACGGCTACATGGATCCTGAATACATTTCCACAAGCAAGTTAACAACGAAGAGTGACATATACAGTTTTGGTATCATAGTTTTTGAGCTCATCACTGCCATCCACCCTCATCAAAATTTGATGGAGTATGTTAACCTTGCTGCAATGGATCATGATGGTATAGATGAGATTCTTGACAAGAAAATAGTGGGAAAATGCAATCTTGAAGAAGTGAGGCAGCTTGCAAAGATTGGACACAAATGCTTGCACAAATCACCTAAGAAACGTCCCTCCATAGGTGAGGTTTCTCAGCTCATATCAAGAATAAAGCAAAGGCGTCAGAGACGTCTGACAGAAGATAACTTGTCATTTGCAAGCAACAACTTTTCTCGAGCTGTGAGTCGATTAGAAGATCGACAGGTTGAACTTAGCAGGATGTCAACCATTAGCCTAACAGAAACTGTATGA 1278 0.3998 MVRQTDLVIIGVSVGLALGILISCLIFFGIRWYKKRAAHLRLSANESSITTLPIRTNGLGTSTDFSASLDSSIATSRSENLKKNSHFTWWNHQNRDRFTSASGILKYSYREIQKATQNFTTTLGQGSFGTVYKATMPTGEVVAVKVLAPNSKQGEKEFQTEVFLLGRLHHRNLVNLVGYCVDKGQRILVYQYMSHGSLANLLYGEEKVLSWDERLQIVLDISHGIEYLHEGAIPPVIHRDLKSANILLDHSKRAKVADFGLSKEEIFDGRNSGLKGTYGYMDPEYISTSKLTTKSDIYSFGIIVFELITAIHPHQNLMEYVNLAAMDHDGIDEILDKKIVGKCNLEEVRQLAKIGHKCLHKSPKKRPSIGEVSQLISRIKQRRQRRLTEDNLSFASNNFSRAVSRLEDRQVELSRMSTISLTETV* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0473 425 PANTHER OS01G0750732 PROTEIN 9 419 - -
Pvu4g0473 425 SMART serkin_6 117 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0473 425 Gene3D Phosphorylase Kinase; domain 1 79 192 - -
Pvu4g0473 425 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 419 - -
Pvu4g0473 425 ProSiteProfiles Protein kinase domain profile. 117 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0473 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Pvu4g0473 425 Gene3D Transferase(Phosphotransferase) domain 1 193 402 - -
Pvu4g0473 425 SUPERFAMILY Protein kinase-like (PK-like) 87 374 IPR011009 -
Pvu4g0473 425 CDD STKc_IRAK 123 379 - -
Pvu4g0473 425 Pfam Protein kinase domain 121 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0473 425 ProSitePatterns Protein kinases ATP-binding region signature. 123 145 IPR017441 GO:0005524
Pvu4g0473 425 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0473 Pvu-Chr4 4954681 4959412 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0473 103 376 Receptor kinase-like Gene Family AT3G19300 42.756 3.90e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pvu4g0473 Pkinase 2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0473 - - gmx:100819995 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0258 8 2136230 2140612 Pvu4g0473 4 4954681 4959412 PCT