Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0459 ATGGAAAACGTCCTTGAACGATATGAGAGACATGCCCACATAGGGCAACTTGTTGAAGATGGTGATGAATCACAGGGCAACTGGTCCTTGCAATGCTTCAAGCTCACCGGCAAAGTTGAAGTCTTAGAGAGAAACTTAAGGAACTTTGTGGGACAAGATCTGGATCCCTTGAACTTGAGAGAGCTTCAGAGTTTGGAGCATCAGCTTGACACAGCTATAAAGCGCATCCGAACTAAAAAGAGCCAAGTTATGAATGAATCCATCTCAGATCTGCAGAAAAAGGCAAAGCAATTGCAAGAGCAAAATGGCACACTTACAAAGAAGATTAAGGAGAAAGGGAAGGCAGTGGCTGAACTTCCACAATGTGTGCCAGAAACCTTAGGTCAAACATGCCCTCTAGAGCTACAACCACAACATAGACTTGTTCCTTCTTTAACACTCGGTGAGAATCTAGAAGCAGCAGCAGCACTGCAGGAAGTGGATGAAGCACGAGCAGTTGGTGGTACCACTACTCTGATCCCACCATGGATGCTGCATCATTTTACAAGATAA 552 0.4475 MENVLERYERHAHIGQLVEDGDESQGNWSLQCFKLTGKVEVLERNLRNFVGQDLDPLNLRELQSLEHQLDTAIKRIRTKKSQVMNESISDLQKKAKQLQEQNGTLTKKIKEKGKAVAELPQCVPETLGQTCPLELQPQHRLVPSLTLGENLEAAAALQEVDEARAVGGTTTLIPPWMLHHFTR* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0459 183 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu4g0459 183 Coils Coil 62 108 - -
Pvu4g0459 183 PANTHER MADS BOX PROTEIN 1 158 - -
Pvu4g0459 183 PANTHER TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A-LIKE ISOFORM X1 1 158 - -
Pvu4g0459 183 Pfam K-box region 22 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0459 Pvu-Chr4 4792367 4799405 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0459 1 182 MADS-box Gene Family AT5G60910 44.560 5.22e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0459 K09264 - gmx:100787971 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0284 8 2299894 2307811 Pvu4g0459 4 4792367 4799405 PCT