Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0447 ATGCTTTTCCCTTTCACCTTCAACCCCACGATCCGATCCCTCGTCAAACCCTGTGCATGCATTCTGCTTTTTCTTCTCTTCTCTTGCACGTGCTTCACTTCAACAGAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATGAGTTGGACACCTGATGGTTATGTTGCTGTTGTTACAATGAACAACTTCCAAAAATATCGTCATATCTCAGCGCCTGGGTGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTAATATGGAGCATGGTGGGAGGACAGACCACTGAACAAGGGGATTGCTCAAGATTTAAGGGAAACATCCCACATTGCTGTAGAAAGGACCCAACAGTTGTAGATTTACTTCCCGGAACGCCTTATAATCAGCAAATTGCAAACTGCTGCAAAGGTGGTGTACTCAGCTCATGGGCACAGGATCAATCCAAAGCAGTTTCAGCCTTTCAAATCAGTGTAGGTAGTGCTGGTACCACGAACAAAACTGTCAAACTGCCACAAAGTTTCACCTTGAAAGCACCAGGACCAGGTTACACATGTGGCCCAGCGAAAATTGTGGAACCAACTGAATTCATACAACCAGACAAAAGAAGAGTGACCCAAGCTCTCATGACATGGAATGTGACATGCACATATTCACAATTTCTTGCTCAGAGAGCGCCCACTTGCTGCGTCTCACTCTCATCTTTCTATAATGATACTGTTGTACCCTGCTCTACATGTGCATGTGGCTGCCAGGGCAACTCATCACTAACAGGGGACTGTGTAAATCCAGATTCACCACATCTTGCATCAGTTGTTTCCAAATCTGGACCTGGTAAAAGTAGTATTACACCTTTGGTTCGATGTACTCGTCATATGTGTCCTATCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGCGTGAAGGTCACTGTTACTAATTTCAATTACAGGATGAATTATTCTGATTGGAACTTGGTTATTCAACATCCAAACTTTAGCAATCTGACCCAGCTTTTCAGTTTCAACTACCAGGCAATAACTCCCTACGGATCAATAAATGATACAGCAATGCTTTGGGGAGTTAAGTTCTACAATGATTTTCTCATGCAAGCTGGTACTCTTGGTAATGTACAGATGCCACCACCTGATGCTTATCCATGGTTACCTAATGCTGGTTCCAGGCAAGAGGTTTCCCTGCTTGTTTTGATAATGACCTCTTTGGTGGCCTTAGTATTTCAAGCATACGCTTAA 1281 0.4356 MLFPFTFNPTIRSLVKPCACILLFLLFSCTCFTSTEAYDPLDPNGNITIKWDIMSWTPDGYVAVVTMNNFQKYRHISAPGWSLGWTWAKKEVIWSMVGGQTTEQGDCSRFKGNIPHCCRKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDQSKAVSAFQISVGSAGTTNKTVKLPQSFTLKAPGPGYTCGPAKIVEPTEFIQPDKRRVTQALMTWNVTCTYSQFLAQRAPTCCVSLSSFYNDTVVPCSTCACGCQGNSSLTGDCVNPDSPHLASVVSKSGPGKSSITPLVRCTRHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSDWNLVIQHPNFSNLTQLFSFNYQAITPYGSINDTAMLWGVKFYNDFLMQAGTLGNVQMPPPDAYPWLPNAGSRQEVSLLVLIMTSLVALVFQAYA* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0447 426 PIRSF COBRA 388 426 IPR006918 GO:0010215|GO:0031225
Pvu4g0447 426 PIRSF COBRA 10 389 IPR006918 GO:0010215|GO:0031225
Pvu4g0447 426 PANTHER COBRA-LIKE PROTEIN 17 388 - -
Pvu4g0447 426 PANTHER COBRA-LIKE PROTEIN 389 424 - -
Pvu4g0447 426 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0031225
Pvu4g0447 426 PANTHER PROTEIN COBRA 17 388 IPR006918 GO:0010215|GO:0031225
Pvu4g0447 426 PANTHER PROTEIN COBRA 389 424 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0447 Pvu-Chr4 4631902 4636405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0447 21 422 COBRA Gene Family AT3G02210 66.667 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0447 - - gmx:100797383 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0447 4 4631902 4636405 Pvu8g0298 8 2417240 2420760 PCT
Pvu8g0297 8 2408631 2412334 Pvu4g0447 4 4631902 4636405 PCT