Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0446 ATGGCCTCTTCCGATATTAATTGGGACAGGCTAGATAAAACGAAGTTCTATGTCGTGGGAGCAGGACTCTTTACAGGTGTTACAGTAGCACTCTACCCGGTTTCTGTTGTGAAAACTAGGCTGCAGGTTGCTTCAAAGGATACTTTGGAGAGAAGTGCATTATCTGTTGTGAAAGGATTACTTAAAACGGATGGAATCCGTGGTTTGTATAAAGGATTTTTTACAGTCATGACTGGTACAATTCCTACCAGAATCATATTTCTTACTGCATTGGAGACGACAAAGGTGGCTTCCCTCAGGATGCTGGAGCCATTCAGACTATCTGAAACTACTCAAGCTGCCATATCAAATGGAGTTGCAGGCATGACATCATCACTTTTGGCACAAGCTGTGTTTGTTCCAGTTGATGTGGTTAGCCAAAAGCTGATGGTGCAAGGATACTCAGGCCATACCCAATATAGGGGGGGTTTAGATGTTGCTCGTAAGGTGTTAAGGTCTGATGGCATTAGGGGATTATATAGAGGATTTGGTCTATCTGTCATGACTTATGTTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGCTCAAGTAAACACTACTTATGGAGATTCTTGGGGGATAACTCCTGTGAGGAAGGCGCTCCTAGTCTACCAAGGATTATGTTAGTTCAGGCTACCGGAGGGATCATTGCTGGTGCTACTGCATCCTGCATTACAACCCCGTTGGATACAATCAAGACACGGTTACAGGTGACTGGACTTGAAAAGAGAATCTCTGTAAAACAAGTTGTTAAAGATTTGATTATTGAAGATGGTTGGAAAGGTTTATATAGAGGACTAGGTCCAAGGTTTTTCAGCATGTCAGCGTGGGGTACTTCAATGATTCTGGCTTATGAATATCTGAAGCGCGTGTGTGCAAAAGATGAAGATGTGTAA 936 0.4306 MASSDINWDRLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVASKDTLERSALSVVKGLLKTDGIRGLYKGFFTVMTGTIPTRIIFLTALETTKVASLRMLEPFRLSETTQAAISNGVAGMTSSLLAQAVFVPVDVVSQKLMVQGYSGHTQYRGGLDVARKVLRSDGIRGLYRGFGLSVMTYVPSSAVWWASYGSSKHYLWRFLGDNSCEEGAPSLPRIMLVQATGGIIAGATASCITTPLDTIKTRLQVTGLEKRISVKQVVKDLIIEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRVCAKDEDV* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0446 311 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 310 - -
Pvu4g0446 311 Gene3D Mitochondrial carrier domain 14 310 IPR023395 -
Pvu4g0446 311 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Pvu4g0446 311 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Pvu4g0446 311 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Pvu4g0446 311 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 1 310 - -
Pvu4g0446 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Pvu4g0446 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Pvu4g0446 311 SUPERFAMILY Mitochondrial carrier 9 301 IPR023395 -
Pvu4g0446 311 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Pvu4g0446 311 Pfam Mitochondrial carrier protein 224 308 IPR018108 -
Pvu4g0446 311 Pfam Mitochondrial carrier protein 21 96 IPR018108 -
Pvu4g0446 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 304 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0446 Pvu-Chr4 4615284 4621396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0446 6 309 Chloroplast and Mitochondria Gene Families AT5G15640 72.964 1.29e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0446 K15121 - gmx:100819519 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0446 4 4615284 4621396 Pvu8g0299 8 2422343 2427346 PCT