LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu4g0443	ATGACTATCACCTTCACCACCTCCTTAACACTCTTCTTCCTCCTTCTACACTTCTCCACACACCTCCAAGCCAATTATTTCCCAGAGGATATTTTCACCATCAGTTGCGGCACCACCGGGAATTCCTCCGACGGTCAAAGAAGGTGGACCGGCGACGAAGAGTACTTATCTTCCCAAGACGGCACCGTTTCAGAGAAGGCAACAACACAGTCTTTTTCCATCAATGAAATCCCCTACTCCACTGCACGATTGTCCCGTTCCCAATTCAACTACTCCTTCCCCGTCTCCCCAGGCCCCAAATTCCTTCGCCTCTTCTTCTACCCTGCCGATTACCCTTCTTTTTCCCGCAGCCACGCATCTTTCACCGTTCAATCCAACCAATTCACTCTCCTCAACGCTTTCAACGCCTCTCTTCACGCCGACGCTCAAGCCGCCGACGCTCAAGCTGCTGACGCTCAAGCCACTAAGACTATCTTCCGAGAATATGTGGTCAACGTCAACGACGGTGAGAGGCTTATCCTCACCTTCACTCCCTCCCATCCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAACCGATTTATATTACACCCCACCAAATGAGATAGGCTTCACGCAAGTCGGAACCACCACGCTCTACAGCGTTGAAACCAGCTCTGCGCTCCAGACTGAGTATAGAATCAACTCTGGAGGTCAACAAATCCCTCCACAAAACGACATCTGTTTGTTCAGGGATTGGGCTGACGAAGAAGCTTTTTTTATTAAAGAAAATCAACAGAATAATGATCTACCAGCTGACATGGATGGGAAGATGAGCATAACCGTCAGTCCCGATTACCTGGCACCCAAGGAACTGTTCAGAACAGCGCGTAACCAGGGCACAAACGGCACTCTGAACAAAATGAGCAACCTGACTTGGGTGTTCCCCGTTGATTGTGGCTTCACTTACGTTCTCAGGTTCCACTTTTGCGAGCTTGATCCTCTTATCAATGACATGGGTGACAGACGATTCTTCATTTACATAAATAACCAGTTGGCTGAAGATCGTGCAGATGTATTGAAATGGAGTGAGAAACAAAAAGGTGTAGCTGTGCACAGAAACTACGCCGTTATGATTCCCAAGAATGGTAATCAGAAAAGGTTTAATCTCTCGCTTCAAATGCACCCTTACGAAAGCAGTGTGGATACGACTTATAGCGACGCCTTCCTTAACGGTCTCGAGATCTTTAAAATCAGCGAAGACCAATCAAACAACCTAGCCGGACCCAATCCAGACCCGTGGACTCCGCTGTTGTTCTCAACGACCAAGTCAACCAACGACTACAATTTTTCTCTGCCGTCTGATCAATGCCGTCAGTTTTCCCTCGTCGAGATCAAAGCCGCCACCAAAAACTTCGACAGCGTCTTCATCGTCGGCGAAGGGGGATTTGGCCACGTGTACAAGGGCTACATCGACAACGGTTCAATCCCGGTCGCCATCAAGCGCCTTAGACAGGGTTCCCAGCAGGGGGCTTGCGAGTTCGTGAACGAGATCCAAATGCTCTCGCAGCTCCGCCATCGCCATCTGGTCTCACTCATCGGTTACTGCTGCGATAACAAAGAGATGATCCTCGTTTACGACTTCATGGGACGTGGAAACCTCCGCGACCATCTCTACGGCACCGACAATCCCTCTCTCTCGTGGAAGCAGCGCTTGAAGATTTGCATTGGCGCCGCGCGCGGTCTACGCTATCTTCACAGTGGTGCGAAGCACGTGATCATCCATCGGGACGTGAAAACGACGAACATCTTGTTGAATGAGAAGTGGGTGGCGAAAGTTTCGGACTTCGGGTTATCAAAAATAGGGCCGAATGAGATGTCGAAGGCCCATGTGAGCACCGCCGTGAAAGGCAGCTTTGGGTATTTGGATCCGGAGTATTTTATTCGGCAGCGGCTGACGGAGAAGTCTGACGTGTATTCTTTTGGAGTGGTGTTGTTTGAGTGTTTCGCCATGATTTGCGAGATTGGAATCAGTTGTTTGTCACAAGAAGGGATTCAGAGGCCGTCCATGAACGATGTCGTTTTGATGCTGGAGTCTGCATTGAAACTGCAAGAGAGTGCCGACGAAAGCGAAGAGGAAGTTCGTGAAGATGTGTTTGATATAGAAGAGCACCACATTAGTTCGAAGGCCAATGATAAGTTGATGCTTGAGTTGTTTTCCGAGATTGTCGACCCAAAGCCACGTTGA	2241	0.4931	MTITFTTSLTLFFLLLHFSTHLQANYFPEDIFTISCGTTGNSSDGQRRWTGDEEYLSSQDGTVSEKATTQSFSINEIPYSTARLSRSQFNYSFPVSPGPKFLRLFFYPADYPSFSRSHASFTVQSNQFTLLNAFNASLHADAQAADAQAADAQATKTIFREYVVNVNDGERLILTFTPSHPNSYAFINGIEVLSMPTDLYYTPPNEIGFTQVGTTTLYSVETSSALQTEYRINSGGQQIPPQNDICLFRDWADEEAFFIKENQQNNDLPADMDGKMSITVSPDYLAPKELFRTARNQGTNGTLNKMSNLTWVFPVDCGFTYVLRFHFCELDPLINDMGDRRFFIYINNQLAEDRADVLKWSEKQKGVAVHRNYAVMIPKNGNQKRFNLSLQMHPYESSVDTTYSDAFLNGLEIFKISEDQSNNLAGPNPDPWTPLLFSTTKSTNDYNFSLPSDQCRQFSLVEIKAATKNFDSVFIVGEGGFGHVYKGYIDNGSIPVAIKRLRQGSQQGACEFVNEIQMLSQLRHRHLVSLIGYCCDNKEMILVYDFMGRGNLRDHLYGTDNPSLSWKQRLKICIGAARGLRYLHSGAKHVIIHRDVKTTNILLNEKWVAKVSDFGLSKIGPNEMSKAHVSTAVKGSFGYLDPEYFIRQRLTEKSDVYSFGVVLFECFAMICEIGISCLSQEGIQRPSMNDVVLMLESALKLQESADESEEEVREDVFDIEEHHISSKANDKLMLELFSEIVDPKPR*	747

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu4g0443	746	Pfam	Protein tyrosine and serine/threonine kinase	476	669	IPR001245	GO:0004672\|GO:0006468
	Pvu4g0443	746	PANTHER	OS07G0166700 PROTEIN	17	420	IPR045272	GO:0004714\|GO:0006468
	Pvu4g0443	746	PANTHER	OS07G0166700 PROTEIN	665	708	IPR045272	GO:0004714\|GO:0006468
	Pvu4g0443	746	PANTHER	OS07G0166700 PROTEIN	434	666	IPR045272	GO:0004714\|GO:0006468
	Pvu4g0443	746	ProSiteProfiles	Protein kinase domain profile.	470	746	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu4g0443	746	PANTHER	RECEPTOR-LIKE PROTEIN KINASE FERONIA	17	420	-	-
	Pvu4g0443	746	PANTHER	RECEPTOR-LIKE PROTEIN KINASE FERONIA	665	708	-	-
	Pvu4g0443	746	PANTHER	RECEPTOR-LIKE PROTEIN KINASE FERONIA	434	666	-	-
	Pvu4g0443	746	Gene3D	-	29	196	-	-
	Pvu4g0443	746	Gene3D	-	225	419	-	-
	Pvu4g0443	746	Gene3D	Transferase(Phosphotransferase) domain 1	547	724	-	-
	Pvu4g0443	746	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	591	603	IPR008271	GO:0004672\|GO:0006468
	Pvu4g0443	746	SUPERFAMILY	Protein kinase-like (PK-like)	448	699	IPR011009	-
	Pvu4g0443	746	SMART	serkin_6	470	699	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu4g0443	746	Gene3D	Phosphorylase Kinase; domain 1	435	546	-	-
	Pvu4g0443	746	Pfam	Malectin-like domain	34	416	IPR024788	-
	Pvu4g0443	746	ProSitePatterns	Protein kinases ATP-binding region signature.	476	499	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu4g0443	Pvu-Chr4	4585766	4588288	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu4g0443	2	711	Receptor kinase-like Gene Family	AT3G46290	34.644	5.62e-137	422

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pvu4g0443		Malectin_like	1.1e-36	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu4g0443	-		-	pvu:PHAVU_004G040900g	1462.2