Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0434 ATGACCTTCAACGCTGTCATCTTCCTCCTTCTCCTCCTCTTCCCACACTTCCAAGGCTACACCCCACTCGACAATTTCACCATCACTTGCGGTTCCTCTGGAACATCCTACGACGGCCAAAGGACATGGACCGGGGACATAGATTCTATGCTCTTAACAAACGAAGACGCCACCGTTTCAGCTAAACCCACAACGCTATCTCCTTCCACCAACCATGTCCCCTACGCCACTGCTCGCCTTTCTCCTTCCCAGTTCAGTTACTCCTTCTATTTCCACACAGGGGGCCCAAAATTCCTTCGCCTCTTCTTCTTCCCCGCTTCTTACCCTTCTTTTCCTCGCACCCTCTCATCCTTCTCTGTTCACTCCAACCAATTCATCCTCCTCCAAGATTTCAACGCCTCTCTCAACGCCGACGCTGAAAACAAGGAAATCATATTCAAAGAATACATCGTCTACGTGGAGGACGGTCAGGGTCTTATCCTCATCTTCACTCCCTCGCAGTCCAACTCCTACGCTTTCATCAACGGAATCGAGGTACTTTCCATGCCAAGCAATTTATATTACACGTCAGTAACTGACACGGGCTTCACGAACGTGGGAAGTAGCAAACCCTTCGTTGTTGGAACCCGCTTTGCAATGGAGACTGGGTATAGAATCAATGTGGGAGGACAAGAAATATCGCCAAGAAACGACACCGGTTTGTTCAGAAAATGGGCCGGTGACGAAGAACGTTATTTCATTAAACAAAACACTGGTGTATCAGCAATGGCGGATAGAAAGATGAACATAACAGTGAAGACTGACTACGTGGCACCCGAGGAACTGTACAGAACAGCGCGTAGCATGGGTTCTAACGCCTCCCTGAACCAAATCAGCAACCTCACATGGGAGTTTCCCGTTGATTCTGGCTTCACTTACGTCCTCAGGCTCCACTTTTGCGAGTTTGAGCACGATATTGAAGACGCCGGTGAAAGGGTCTTCTTCATTTACATAGCAAGCAAGTTGGCGGAGAGTCGCGCTGATGTTATGTTATGGAGCCAGAAACAGAAAGGTTTCGGCGTGTATAAAGAGTATGCCGTTTTCATTTCCAAGAATATTTATCAGAAAAAGATTAACCTCTCCCTGCAATTGCATCCTTATGATAGTAGGGGTACCAAGTATAGCGATTCCTTCCTCAACGGTCTCGAGATCTTTAAAATGAGCGACACAAGGTCTAACAGCCTCGCCGGACCTAACCCGGACCCGATTAAGACACCACACCAAAAGGGAAGTAACAGAAGGCGAATGATTGGTATCACGGCGGGGATAGTATCCGGTGTCGTTTTTATCTCGCTTGTCGTTTTCTTTGTTCTGTTCTCCACCACTTCCAAGTGGACTCCGCTGTTGTTCTCAACGAACAAGTCAACCAAGGACCACAATTTTTCTCTGCCGTCTGATCAATGCCGTCGGTTTTCCCTTGTCGAGATCAAAGCCGCCACCAAAAACTTCGACAGTGCCTTCATCGTCGGCGACGGGGGATTTGGCCACGTGTACAAGGGCTACATCGAGGACGGTTCAATCCCCGTCGCCATCAAGCGCCTTAGACAGGGTTCCCAGCAGGGGGCTTGCGAGTTCGTGAACGAGATCCAGATGCTCTCGCAGCTCCGCCACCGCCATCTGGTCTCACTCATCGGTTACTGCTGCGATAACAAAGAGATGATCCTCGTTTACGACTTCATGGGACGCGGAAACCTCCGCGACCATCTCTACGGCACCGACAATCCCTCTCTCTCGTGGAAGGAGCGCTTGAAGATTTGCATTGGCGCCGCGCGCGGTCTACGCTATCTTCACAGTGGCGCGAAGCACGTGATCATTCATCGGGACGTGAAAACGACGAACATCTTGTTGGATGAGAGGTGGGTTGCGAAAGTTTCGGACTTCGGGCTATCCAAAATAGGGCCGAATGAGATGTCGAAGGCCCATGTGAGCACCGCCGTGAAAGGTAGCTTTGGGTATTTGGATCCGGAGTATTTTATTCGGCAGCGGCTGACGGAGAAGTCTGACGTGTATTCTTTGGGGGTGGTGTTGTTTGAGGTACTCTGTGCCCGTTCTGCTGTGATCCATACAGAAGAAATCGAACAGGTGTCACTAGCTAATTGGGCCAGATATTGCTACCAAAACGGGACGGTGGCGGAGATTGTGGATCCCATATTAAAGGGGAAGATCGCTCCCCAGTGTTTCGCCATGTTTTGCGAGATTGGAATCAGTTGTTTGTCACAAGAAGGGGTGCAGAGGCCTTCCATGAACGATGTCGTTTTGATGCTGGAGTCTGCATTGAAACTGCAAGAGAGTGCCGACGAAAGCGAAGAGGAAGCTCGTGAAGAAGTGTTTGATACCGAAGAGCACCACAATATTTCGAAGGACAATGATAAGTTGATGTTTGAGTTGTTTTCCGAGATTGTCGACCCAAAGCCACGTTGA 2460 0.4963 MTFNAVIFLLLLLFPHFQGYTPLDNFTITCGSSGTSYDGQRTWTGDIDSMLLTNEDATVSAKPTTLSPSTNHVPYATARLSPSQFSYSFYFHTGGPKFLRLFFFPASYPSFPRTLSSFSVHSNQFILLQDFNASLNADAENKEIIFKEYIVYVEDGQGLILIFTPSQSNSYAFINGIEVLSMPSNLYYTSVTDTGFTNVGSSKPFVVGTRFAMETGYRINVGGQEISPRNDTGLFRKWAGDEERYFIKQNTGVSAMADRKMNITVKTDYVAPEELYRTARSMGSNASLNQISNLTWEFPVDSGFTYVLRLHFCEFEHDIEDAGERVFFIYIASKLAESRADVMLWSQKQKGFGVYKEYAVFISKNIYQKKINLSLQLHPYDSRGTKYSDSFLNGLEIFKMSDTRSNSLAGPNPDPIKTPHQKGSNRRRMIGITAGIVSGVVFISLVVFFVLFSTTSKWTPLLFSTNKSTKDHNFSLPSDQCRRFSLVEIKAATKNFDSAFIVGDGGFGHVYKGYIEDGSIPVAIKRLRQGSQQGACEFVNEIQMLSQLRHRHLVSLIGYCCDNKEMILVYDFMGRGNLRDHLYGTDNPSLSWKERLKICIGAARGLRYLHSGAKHVIIHRDVKTTNILLDERWVAKVSDFGLSKIGPNEMSKAHVSTAVKGSFGYLDPEYFIRQRLTEKSDVYSLGVVLFEVLCARSAVIHTEEIEQVSLANWARYCYQNGTVAEIVDPILKGKIAPQCFAMFCEIGISCLSQEGVQRPSMNDVVLMLESALKLQESADESEEEAREEVFDTEEHHNISKDNDKLMFELFSEIVDPKPR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0434 819 PANTHER OS07G0166700 PROTEIN 12 781 IPR045272 GO:0004714|GO:0006468
Pvu4g0434 819 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 12 781 - -
Pvu4g0434 819 CDD STKc_IRAK 502 769 - -
Pvu4g0434 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Pvu4g0434 819 Pfam Protein tyrosine and serine/threonine kinase 502 766 IPR001245 GO:0004672|GO:0006468
Pvu4g0434 819 Pfam Malectin-like domain 28 400 IPR024788 -
Pvu4g0434 819 MobiDBLite consensus disorder prediction 777 797 - -
Pvu4g0434 819 Gene3D Phosphorylase Kinase; domain 1 458 572 - -
Pvu4g0434 819 MobiDBLite consensus disorder prediction 404 424 - -
Pvu4g0434 819 Gene3D - 25 183 - -
Pvu4g0434 819 Gene3D - 211 401 - -
Pvu4g0434 819 ProSiteProfiles Protein kinase domain profile. 496 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0434 819 SMART serkin_6 496 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0434 819 Gene3D Transferase(Phosphotransferase) domain 1 573 798 - -
Pvu4g0434 819 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Pvu4g0434 819 SUPERFAMILY Protein kinase-like (PK-like) 480 771 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0434 Pvu-Chr4 4492159 4494985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0434 20 781 Receptor kinase-like Gene Family AT3G51550 49.751 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu4g0434 Malectin_like 3.1e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0434 - - vra:106770147 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0434 4 4492159 4494985 Pvu8g0308 8 2486348 2488942 PCT