Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0430 ATGACCTCCTTAACACTCTTCTTCCTCCTTCTCTACTTCTCCCTACACCTCCACGCCTACACCCCCGAGGATATTTTCACCATCAGTTGCGGCACCACCGGGAAATCCTCCGACGCTCAAAGAAGGTGGACCGGCGACGAAGACACAAAGTACTTATCTTTCAAAGAAGGCTCCGTTTCAGAGAAGGCAACAAGACAGTCTCCTTCCACCAATCAAATCCCCTATTCCACTGCACGCTTGTCCCGTTCCCAATTCAACTACTCCTTCCCCGTCTCCCCAGGCCCCAAATTCCTTCGCCTCTTCTTCTACCCTTCCGACTACCCTTCCTTTCCCCGCAGCCACGCATCTTTCACCGTTCAATCCAACCAATTCACTCTCCTCAACGCTTTCAACGCCTCTCTTCACGCCGACGCTCAAGTGGCCGACGCTCAAGCCGCCGACACTATCTTCCGAGAATACGTTGTCAACGTCAACGACAGTGAGAGGCTTGTCCTCACCTTCACTCCCTCCTATCCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAACCGATTTATATTACACTCCACAAGATGATACAGGAGTCAAGCTAGTGGGACATGGTACGCAATTCAACGTTCTAACCAGCTTCGCGCTCCAGACTGAGTATAGAATCAAATCTGGGGGCCAAGAAATCCCGCCACAAAACGACACCGGTTTGCTCAGGGATTGGGCTCACGAAGAAGCTTTTTTTATTAAAGAAAATCCACAGAATAATGATCTATCAGCTGACATCGATGGGAAGATGAACATAACCGTGAATCCTGATTACGTGGCACCGAAGGAACTGTTCAGAACAGCGCGTAACCAGGGCACAAACGGCACTCTGAACCAAATGAGCAACCTGACTTGGGTGTTCCCCGTTGATTGTGGCTTCACTTACGTTCTCAGACTCCACTTTTGCGAGCTTGATCCTCTTATCAATGACATCGGTGACAGACAATTCTTCATTTACATAAATAGCCAGTTGGCTCAAGATCGTGCAGACGTAATGAAATGGAGTGCGAAACGAAAAGGCCTAGCTGTGCACAGAAACTACGCCGTAATGATTCCCATGAATGGTACTCAGAAAAAGTTTAATCTCTCGCTTCAAATGCATCCTTACGACAGCAGTGTGGATACGGATTACAGCGACGCCTTCCTGAACGGTCTCGAGATCTTCAAAATCAGCGAAGCTGGCTCAAACAACCTCTCAGGACCCAACCCGGACCCGGTTCAGACTCCACAGAACAACAATCCCGACCAAAACGGAAAGACCAGAAGCGGAAGTGAAACGACGATAATTGCCGTCCTAGCAGGGGCGGTGTCCGGCGTCGTTTTGATCTCGCTAATCGTTTTCCTTGTCCTGTTTTTCCGACTCAAGAGAACAACAAAGCCAAAAGATTACAACACGTCAAAGTCTTCCACGACTTCCAAGTGGGGTCCACTCTCCTTCACAACGACCAAGTCAACTACCACAAACACTTCTCTACCGTCCGATCTCTGCCGCCACTTCTCCCTTTCGGAGATCAAAGCCGCCACTAAAAACTTCGACGATGTCTTCATCGTGGGCGTCGGGGGATTCGGCCACGTGTACAAGGGCTACATCGACGCCGGTTCCACCCCGGTGGCCATCAAGCGCCTGAAACCGGAATCGCAGCAGGGTGCGCACGAGTTCATGAACGAGATCGAGATGCTCTCGCAGCTCCGCCATCTTCATCTCGTGTCCCTAATCGGATACTGCAACGAGATGAACGAGATGATCCTTGTCTACGACTTCATGGAGCGTGGCACCCTACGAGACCATCTCTACAACACGGACAACCCCGCCATCTCGTGGAAGCAGCGGTTGCAGATCTGTATCGGCGCCGCGCGTGGACTCCACTATCTCCACACTGGCGCGAAGCACACGATCATCCACCGCGACGTGAAAAGCACGAACATCTTGTTGGATGAGAAGTGGGTTGCAAAGGTTTCGGACTTTGGGCTTTCAAGATTTGGGCCCACAGGCATGGACAAGTCCCACGTGAGTACCCATGTGAAGGGAAGCTTCGGCTATATCGATCCGGAATACTACAAACGTCATCGTGTGACGGAAAAGTCTGATGTTTACTCCTTCGGCGTTGTGCTGTTTGAGGTACTGTGTGGTCGTCCACCTTTGGTTCACTCTGCGGAGACGAAACAGGTGTCGCTTTCTTATTGGGTGAGACATTGTGACCGAATGGGGACCATAACAGAGATTGTGGAGCCGACATTGAAGAAGAAGATAACAGGAGAGTGCCTGAAGAAGTTTTGTGAGATTGGGATGAGCTGTTTGTTGGAAGATGGGGCGAAGAGACCGAGCATGAAGGATGTGGTTGGGATGCTGGAGTTTACCCTGCAGCTACAAGAAAGTGCAGAGCAAAGCGCAATTGAGAAAGGAGTGGAAATTAGTGAATATAGCTTTAGTACTACTGATTTGAGTGTGACTTCCACGACTTCCAGTAGTGAAGACACCAGCTATAGTAATAATACGGTCTTGTCTTGCACTCCTTTCTCAGAGATTATGGATCCAAAGCCGCGTTGA 2598 0.5008 MTSLTLFFLLLYFSLHLHAYTPEDIFTISCGTTGKSSDAQRRWTGDEDTKYLSFKEGSVSEKATRQSPSTNQIPYSTARLSRSQFNYSFPVSPGPKFLRLFFYPSDYPSFPRSHASFTVQSNQFTLLNAFNASLHADAQVADAQAADTIFREYVVNVNDSERLVLTFTPSYPNSYAFINGIEVLSMPTDLYYTPQDDTGVKLVGHGTQFNVLTSFALQTEYRIKSGGQEIPPQNDTGLLRDWAHEEAFFIKENPQNNDLSADIDGKMNITVNPDYVAPKELFRTARNQGTNGTLNQMSNLTWVFPVDCGFTYVLRLHFCELDPLINDIGDRQFFIYINSQLAQDRADVMKWSAKRKGLAVHRNYAVMIPMNGTQKKFNLSLQMHPYDSSVDTDYSDAFLNGLEIFKISEAGSNNLSGPNPDPVQTPQNNNPDQNGKTRSGSETTIIAVLAGAVSGVVLISLIVFLVLFFRLKRTTKPKDYNTSKSSTTSKWGPLSFTTTKSTTTNTSLPSDLCRHFSLSEIKAATKNFDDVFIVGVGGFGHVYKGYIDAGSTPVAIKRLKPESQQGAHEFMNEIEMLSQLRHLHLVSLIGYCNEMNEMILVYDFMERGTLRDHLYNTDNPAISWKQRLQICIGAARGLHYLHTGAKHTIIHRDVKSTNILLDEKWVAKVSDFGLSRFGPTGMDKSHVSTHVKGSFGYIDPEYYKRHRVTEKSDVYSFGVVLFEVLCGRPPLVHSAETKQVSLSYWVRHCDRMGTITEIVEPTLKKKITGECLKKFCEIGMSCLLEDGAKRPSMKDVVGMLEFTLQLQESAEQSAIEKGVEISEYSFSTTDLSVTSTTSSSEDTSYSNNTVLSCTPFSEIMDPKPR* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0430 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Pvu4g0430 865 Gene3D Phosphorylase Kinase; domain 1 492 604 - -
Pvu4g0430 865 CDD STKc_IRAK 534 801 - -
Pvu4g0430 865 Gene3D - 216 408 - -
Pvu4g0430 865 Gene3D - 23 187 - -
Pvu4g0430 865 PANTHER OS07G0166700 PROTEIN 12 823 IPR045272 GO:0004714|GO:0006468
Pvu4g0430 865 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 12 823 - -
Pvu4g0430 865 SMART serkin_6 528 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0430 865 SUPERFAMILY Protein kinase-like (PK-like) 503 803 IPR011009 -
Pvu4g0430 865 Pfam Malectin-like domain 28 407 IPR024788 -
Pvu4g0430 865 ProSitePatterns Protein kinases ATP-binding region signature. 534 557 IPR017441 GO:0005524
Pvu4g0430 865 ProSiteProfiles Protein kinase domain profile. 528 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0430 865 Pfam Protein tyrosine and serine/threonine kinase 534 799 IPR001245 GO:0004672|GO:0006468
Pvu4g0430 865 MobiDBLite consensus disorder prediction 413 439 - -
Pvu4g0430 865 Gene3D Transferase(Phosphotransferase) domain 1 605 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0430 Pvu-Chr4 4395440 4398037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0430 20 865 Receptor kinase-like Gene Family AT3G51550 47.250 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu4g0430 Malectin_like 5e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0430 - - var:108344516 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0314 8 2531925 2534912 Pvu4g0430 4 4395440 4398037 PCT