Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0429 ATGGGGTTCAGCAGTATCACCCCCTTAAAACTCTTCCTCTTCCACCTCTTTTCGAACCTCCAAGCCTACACCCCAGTCAACAATTTCACAATCAATTGCGGCAGCACTGGAACATCCTACGACGGTGAAACAACATGGACAGGGGACACAGCTTCGATGTTCTTGTCTCATCAAGACAACACCATTTCCGCTAACCCAACACCACCACAATCTAATTCCACCCTTCAACTACCCTACACCACAGCACGCATCTCTCGTTCCCAATTCAATTACTCCTTCCCCGTAACCCCAGGTTCCTATTTCCTTCGCCTCTTCTTCTACCCCGCTTCTTACCCCTCCTTTCCTTCTACACAAATATCCTTCACCGTTCATTGCAACCATTTCACCCTCTTCTACGGTTTCAGCACCGACGAGGATGACACGGAAACCATCTTCAGAGAATACGTCGTCAACGTTGACAACGGTGAGACGCTCAACCTCAGCTTCACTCCCTCACAACCTAACTCCCACGCTCTCATCAACGGAATCCAGGTATTTTCTATCCCAACCGATCTCTATTACACTTCACCACATCATGCAGGCTTCAAGCTCGTCGGAACCCACACCTTGTACCGCGTTACATCCGACACTGCTCTCCACGCACAGTATAGACTCAAAGTAGGTCAAGGAATTTCGCCGCCAAAGAACACCGGTTTGTTCAGAAACTTGGTCGACGGTGACGAACACTATTTAATCAAAGAAAAAAATCCTAACAATGATGATCTAGCAGGCGACGTGGATGGTAAGAGGAACATAACCCTGCACCATGGTTTGGTGGCACCAAAGGTACTGCACAGAACAGAGCCTATCACCAAGAGATCTCTTAAGTTGACTTGGGACTTTCCCGTTGACTCTGGCTTCTACTACTTGGTTAGGCTCCATTTTTGTGAACTTGATCAGAACATCGGTGATAGGGTGTTCTGCATTTACATAGGGAGCGACCTGGCTGAGGATCACGCTGATGTTATGAGATGGAGCAACCAACGTAAAGGTCTCGCTGTGCAGAGAAACTTCGTCGTTTTGATTCCCCAAAAAGATAGTCAAGAAAAGGTTAATCTCTCGCTCCAATTGCATCCTTATTTGAATTCGAGCAATCCGTGCTTGAATGGCCTCGAGATCTTCAAAATCAGCGACTCCAACAACCTCGCCGGCGGCATAGCAGTCGGAGAGAGAAGGAGCGTCTTATCAGTCGAAAAGAAAAGGAATAAACTCAAAATTATCATAGCAGGAATGGTTTTCGTCTCCGTCTCGTTTGTTGGTTTCGTCGTCGTTTGGTGCGCAAGATCCATGTTAATTCCACCCTCGTTCTCAACCAATGCACACGAGATGTCAACCAATGCACACGAACTGTCAGCCAACACGCTCATCTGCCGACGCTTCTACCTCCTCGAGATCAAAGCCGCCACCAACAACTTCGACGACGCTTCCGTCGTCGGCGTCGGGGGATTTGGCCACGTGTACAGGGGCTTCATCCGCAGAATTTTCATCCCGGTGGCTATTAAGCGCCACAAACCGGGTTCAAAGCAGGGCAGTGAAGAGTTTCTGAACGAGATCGAGATGCTCTCGCAGCTCCGCCATCGCAATATCGTTCCACTTATCGGTTACTGCAACAGCAACAAGGAGATGATCCTGGTCTATAATTTCATGGCACGAGGCAACCTCCGCGAGCATCTCTACAACAGCGACAAGCCTCCGTTGCCATGGAAGCGGCGCTTGCAGATTTGTATCGACGCAGCGCACGCGCTGCATTATCTTCACTGCTGCGCCCAAACATACACGATCATCCACAGCGACGTGAAAACCACGAACATCTTGTTGGATGAGGAATGGGTAGCCAAGGTTTCGGACTTTGGGCTTTCCAGAATTGGGCCCACGGGCGATTCCAAGTCCAATGTCTGCACCACCCCTGTGAAGGGTAGCTTTGGGTATATAGATCCAGAGTATTATAAACGACAACATTTGACGGAAAAGTCTGACGTGTACTCTTTCGGAGTAGTGTTGTTTGAGGTACTGTGCGCTCGTCCTCCTCTGATCCGCACGGCGGAGCCGAGAGAAGAGTCGCTTGGGAATTGGGTTAGATACTGTTACCAAAATGGGACCATGGCACAGATATTGGATCCCACCTTGAAGGGGAAGATCGCGCTCAAATGCTTTATAATGTTTTGCGAGATTGGGTTGAGTTGTTTGTCAGATATTGGGGAGCAGAGACCGTCCATGAACGACGTCGTTGGGATGCTTATATATGCCCTGCAACTACAAGAAAGTGCAGACATTAGCGAGGCAAACTCTGATAGCCAAAACCCATTGTCTAGTTAG 2355 0.4892 MGFSSITPLKLFLFHLFSNLQAYTPVNNFTINCGSTGTSYDGETTWTGDTASMFLSHQDNTISANPTPPQSNSTLQLPYTTARISRSQFNYSFPVTPGSYFLRLFFYPASYPSFPSTQISFTVHCNHFTLFYGFSTDEDDTETIFREYVVNVDNGETLNLSFTPSQPNSHALINGIQVFSIPTDLYYTSPHHAGFKLVGTHTLYRVTSDTALHAQYRLKVGQGISPPKNTGLFRNLVDGDEHYLIKEKNPNNDDLAGDVDGKRNITLHHGLVAPKVLHRTEPITKRSLKLTWDFPVDSGFYYLVRLHFCELDQNIGDRVFCIYIGSDLAEDHADVMRWSNQRKGLAVQRNFVVLIPQKDSQEKVNLSLQLHPYLNSSNPCLNGLEIFKISDSNNLAGGIAVGERRSVLSVEKKRNKLKIIIAGMVFVSVSFVGFVVVWCARSMLIPPSFSTNAHEMSTNAHELSANTLICRRFYLLEIKAATNNFDDASVVGVGGFGHVYRGFIRRIFIPVAIKRHKPGSKQGSEEFLNEIEMLSQLRHRNIVPLIGYCNSNKEMILVYNFMARGNLREHLYNSDKPPLPWKRRLQICIDAAHALHYLHCCAQTYTIIHSDVKTTNILLDEEWVAKVSDFGLSRIGPTGDSKSNVCTTPVKGSFGYIDPEYYKRQHLTEKSDVYSFGVVLFEVLCARPPLIRTAEPREESLGNWVRYCYQNGTMAQILDPTLKGKIALKCFIMFCEIGLSCLSDIGEQRPSMNDVVGMLIYALQLQESADISEANSDSQNPLSS* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0429 784 Pfam Malectin-like domain 31 389 IPR024788 -
Pvu4g0429 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Pvu4g0429 784 Gene3D Phosphorylase Kinase; domain 1 448 561 - -
Pvu4g0429 784 PANTHER OS07G0166700 PROTEIN 21 772 IPR045272 GO:0004714|GO:0006468
Pvu4g0429 784 Gene3D - 215 390 - -
Pvu4g0429 784 Gene3D - 27 182 - -
Pvu4g0429 784 ProSiteProfiles Protein kinase domain profile. 485 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0429 784 ProSitePatterns Protein kinases ATP-binding region signature. 491 514 IPR017441 GO:0005524
Pvu4g0429 784 SUPERFAMILY Protein kinase-like (PK-like) 463 764 IPR011009 -
Pvu4g0429 784 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 21 772 - -
Pvu4g0429 784 Pfam Protein tyrosine and serine/threonine kinase 490 757 IPR001245 GO:0004672|GO:0006468
Pvu4g0429 784 Gene3D Transferase(Phosphotransferase) domain 1 562 780 - -
Pvu4g0429 784 SMART serkin_6 485 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0429 Pvu-Chr4 4388019 4390513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0429 23 770 Receptor kinase-like Gene Family AT3G51550 43.812 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu4g0429 Malectin_like 7e-27 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0429 - - vun:114180426 1192.18