Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0428 ATGAGGTTCAGCAGTATCACCGCCTTAAAACTCTTCCTCCTCCACCTCTTTACACTCTTTACGAACCTCCAAGCCTACACTCCAGTCAACAATTTCACAATCAATTGCGGCAGCACTGGAACATCCTACGACGGTGAAACAACATGGACAGGGGACACAGCTTCGATGTTCTTGTCTCATCAAGACAGCACCGTTTCCGCTAACCCAACACCACCACAATCTAATTCCACCCTTCAACTACCCTACACCACAGCACGCATCTCTCGTTCCCAATTCAATTACTCCTTCCCCGTAACCCCAGGTTCCTATTTCCTTCGCCTCTTCTTCTACCCCGCTTCTTACCCTTCCTTTCCTTCTACACAAGCATCCTTCACCGTTCATTGCAACCATTTCACCCTCTTCTACGGTTTCAGCACCGACGAGGATGACACGGAAACGATCTTCAGAGAATACGTGGTCAACGTTGACAACGGTGAGACGCTCAACCTCAGCTTCACTCCCTCACAACCTAACTCCCACGCTCTCATCAACGGAATCCAGGTGTTTTCTATCCCAACCGATCTCTATTACACTTCACCACATCATGCGGGCTTCAAGCTCGTCGGAACCCACACCTTGTACCGCGTTACATCCGACACTGCTCTGCACGCACAGTATAGAGTCAAAGTTGGAGTTCAAGGAATTTCGCCGCCAAAGGACACCGGTTTGTTCAGAAACCTGGTCGCCGGTGACGAACATTATTTAATCAAAGAAAAAAATCCTAACAATAATGGTGAGATGAACATAACCCTGCACCATGGTTCGGTGGCACCCAAGGTACTGTACAGAACAGAGCGTATCACCAAGAGATCTCCTAAGTTGACTTGGAACTTCCCCGTTGACTCTGGTTTCTACTACTTGGTTAGGCTCCATTTTTGTGAACTTGATCAGAACATCACTAACATCGGTGACAGGGTGTTCTGCGTTTACATAGGGAGCGACTTGGCTGAGGATCACGCTGAAGTTTTGAGATGGAGCAACCAACTTAAGGGTCTCGCTGTGCAGAGAAACTTCGTCGTTTTGATTCCCAAAAATGATACTCAGGAAAAGGTTAATCTCTCGCTCCAATTGCACCCTTATTTGAATTCGAGCAATCCGTGCTTGAATGGCCTCGAGATCTTCAAAATCAGCGACTCCAACATCCTCGCCGGACCAAACGCGCAGAACGGCATAGCATTCGAAGAGAGAAGGAATGGCATGGCAGTCGGAAAGAGAAGGAACGTCTTATCAGTCGAAAAGAGAAGGAATAAACACAAAATTAGCATAGCAGGGATGGTATTCGTCTTGGTCTCGGTCTCGTCTGTTGGTTTCGTCTTTAGGTGGGCAAGATCCATGTTCAATCCACGCTCGTTCTCAACCAATGCACACAAGCTGTCAACCAATGCACACCAGCAGTCAACCGATGCAGAAGAACTGCCAGTGAACACGCTCATCTGCCTGCGCTTCTCCCTCGTAGAGATCAAAGCCGCCACCAACAACTTCGACGACGCTTCCGTCGTCGGCGTCGGGGGATTCGGCCACGTGTACAGGGGCTTCATCCGCAGAATTTTCATCCCGGTGACTCTCAAGCTCTTCAAACCCGGTTCAAACGAGATCGAGGTGGCTATTAAGCGCCACAAACCGGGTTCAAAGCAGGGCAGTGAAGAGTTTCTGAACGAGATCGAGATGCTCTCGCAGCTCCGCCATCGCAATATCGTTCCACTTATCGGTTACTGCAACAGCAACAAGGAGATGATCCTGGTCTATAATTTCATGGCACGAGGCAACCTCCGCGAGCATCTCTACAACAGCGACAAGCCTCCGTTGCCATGGAAGCGGCGCTTGCAGATTTGTATCGACGCAGCGCACGCGCTGCATTATCTTCACTGCTGCGCCCAAACATACACGATCATCCACAGCGACGTGAAAACCACGAACATCTTGTTGGATGAGGAATGGGTAGCCAAGGTTTCGGACTTTGGGCTTTCCAGAATTGGGCCCACGGGCGATTCCAAGTCCAATGTCTGCACCACCCCTGTGAAGGGTAGCTTTGGGTATATAGATCCAGAGTATTATAAACGACAACATTTGACGGAAAAGTCTGACGTGTACTCTTTCGGAGTAGTGTTGTTTGAGGTACTGTGCGCTCGTCCTCCTCTGATCCGCACGGCGGAGCCGAGAGAAGAGTCGCTTGGGAATTGGGTTAGATACTGTCACCAAAATGGGACCATTGCACAGATATTGGATCCCACGTTGAAGGGGAAGATCGCGCCCAATTGCTTTAGAGTGTTTTGCCAGATTGGGTTGAGTTGTTTGTCAGAAATTGGATCGCAGAGACCGTCAATGAACGACGTCGTTTGGATGCTCAAGAATGCCCTGAAACTACAAGAAAGTGCAGACATTACCGAGGCGCACTCTAATAGCCAAAACCCATTATCTAGTTAG 2463 0.4925 MRFSSITALKLFLLHLFTLFTNLQAYTPVNNFTINCGSTGTSYDGETTWTGDTASMFLSHQDSTVSANPTPPQSNSTLQLPYTTARISRSQFNYSFPVTPGSYFLRLFFYPASYPSFPSTQASFTVHCNHFTLFYGFSTDEDDTETIFREYVVNVDNGETLNLSFTPSQPNSHALINGIQVFSIPTDLYYTSPHHAGFKLVGTHTLYRVTSDTALHAQYRVKVGVQGISPPKDTGLFRNLVAGDEHYLIKEKNPNNNGEMNITLHHGSVAPKVLYRTERITKRSPKLTWNFPVDSGFYYLVRLHFCELDQNITNIGDRVFCVYIGSDLAEDHAEVLRWSNQLKGLAVQRNFVVLIPKNDTQEKVNLSLQLHPYLNSSNPCLNGLEIFKISDSNILAGPNAQNGIAFEERRNGMAVGKRRNVLSVEKRRNKHKISIAGMVFVLVSVSSVGFVFRWARSMFNPRSFSTNAHKLSTNAHQQSTDAEELPVNTLICLRFSLVEIKAATNNFDDASVVGVGGFGHVYRGFIRRIFIPVTLKLFKPGSNEIEVAIKRHKPGSKQGSEEFLNEIEMLSQLRHRNIVPLIGYCNSNKEMILVYNFMARGNLREHLYNSDKPPLPWKRRLQICIDAAHALHYLHCCAQTYTIIHSDVKTTNILLDEEWVAKVSDFGLSRIGPTGDSKSNVCTTPVKGSFGYIDPEYYKRQHLTEKSDVYSFGVVLFEVLCARPPLIRTAEPREESLGNWVRYCHQNGTIAQILDPTLKGKIAPNCFRVFCQIGLSCLSEIGSQRPSMNDVVWMLKNALKLQESADITEAHSNSQNPLSS* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0428 820 Gene3D Phosphorylase Kinase; domain 1 466 597 - -
Pvu4g0428 820 ProSiteProfiles Protein kinase domain profile. 507 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0428 820 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 28 814 - -
Pvu4g0428 820 Gene3D - 216 390 - -
Pvu4g0428 820 Gene3D - 30 185 - -
Pvu4g0428 820 SUPERFAMILY Protein kinase-like (PK-like) 493 799 IPR011009 -
Pvu4g0428 820 SMART serkin_6 507 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0428 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Pvu4g0428 820 Pfam Malectin-like domain 34 389 IPR024788 -
Pvu4g0428 820 PANTHER OS07G0166700 PROTEIN 28 814 IPR045272 GO:0004714|GO:0006468
Pvu4g0428 820 Gene3D Transferase(Phosphotransferase) domain 1 598 816 - -
Pvu4g0428 820 Pfam Protein tyrosine and serine/threonine kinase 512 793 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0428 Pvu-Chr4 4369649 4372111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0428 26 806 Receptor kinase-like Gene Family AT3G51550 43.442 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu4g0428 Malectin_like 1.7e-30 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0428 - - vun:114180426 1210.28