Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0426 ATGACCTTCAACGCTGTCATCTTCCTCCTTCTCCACCTCTTGCCACACCTCCAAGGCTACACCCCACTCGACAATTTCACCATCACTTGCGGTTCCTCTGGAACATCCTACGACGGCCAAAGGACATGGACCGGGGACACAGAATCTGTGCTCTTAACAAACGAAGACGCCACCGTTTCAGCTAAACCCACAACGCTATCTCCTTCCACCAACCATGTCCCCTACGCCACTGCTCGCCTTTCTCCTTCCCAGTTCAGTTACTCCTTCTATTTCAACACAGCGGGCCCAAAATTCCTTCGCCTCTTCTTCTTCCCTGCTTCTTACCCTTCCTTTCCTCGCACCCTCTCATCCTTCTCCGTTCACTCCAACCAATTCATTCTCCTCCAAGATTTCAACGCCTCTCTCAACGCCGACGCTGAAAACAAGGAAATCATATTCAAAGAATACATCGTCTACGTGGAGGAGGATCAGGCTCTTATCCTCATCTTCACTCCCTCGCAGTCTAACTCCTACGCTTTCATCAACGGAATCGAGGTACTTTCCATGCCAAGCGATTTATATTACACTTCAGAAAATGACACGGGCTTCACGAATGTGGGAAGTACCAACCCCTTCGTCGTTGGAAAACGCTTTGCAATGGAGACTGGGTACAGAATCAAAGTGGGAGAACAAGAAATATCGCCACAAAACGACACCGGTTTGTTCAGAAAATGGGCCGGTGACGAAGAACGTTATTTCATTAAACAAAATACCGGTGTATCAGAGACGTACGGTAAGATGAACATAACAGTGAATCCTGACTACGTGGCACCCGAGGAACTGTACAGAACAGCGCGTAACCAGGGCACAAACGGCACTCTGAACAAAATCAGCAACCTCACTTGGGTGTTCCCCGTTGACTGTGGCTTCACTTACGTTCTCAGGCTCCACTTTTGTGAGCTTGATCCTCATATCAATGACATCGGTGACAGACAATTCTTCATTTACATAAATAGCAAGTTGGCTGAGGAACATGCAGATGTAATGAAATGGAGTGAGAAACAAAAAGGTCTAGCTGTGCACAGAAACTACGCCGTTATGATTCCCAAGAATGATACTCAGAAAAAGTTTAATCTCTCGCTTCAAATGCACCCTTACCAAAGCAGTGTGGATACGACTTACAGCGACGCCTTCATAAACGGTCTCGAGATCTTTAAAATGAGCGACACAAGGTCTAACAGCCTCGCCGGACCTAACCCGGACCAGATTAAGACACCACAGCAAAAGGGAAGTAACAGAAGGCGGATGATTGGTATCACGGCGGGGATAGTATCCGGTGTCGTTTTCATCTCGCTTGTCGTTTTCTTTGTCCTGTTCTCCACCACTTCCAAGTGGACTCCGCTGTTGTTCCCAACGACCAAGTCAACCAACGATCACAATTTTTCTCTGCCATCTGATCAATGCCGTCGGTTTTCCCTGGTGGAGATCAAAGCCGCCACCAAAAACTTCGACAACACCTTCATCGTCGGCGACGGGGGATTTGGCCACGTGTACAAGGGCTTCATCGAGGACGGTTCAATCCCCGTTGCAATCAAGCGCCTTAGACAGGGTTCCCAGCAGGGGGCTTGCGAGTTCGTGAACGAGATCCAGATGCTCTCGCAGCTCCGCCACCGCCATCTGGTCTCACTCATCGGTTACTGCTGCGATAACAAAGAGATGATCATCGTTTACGACTTCATGGGACGCGGAAACCTCCGCGACCATCTCTACGGCACCGACAATCCCTCTCTCTCGTGGAAGGAGCGCTTGAAGATTTGCATTGGCGCCGCGCGCGGTCTACGCTATCTTCACAGTGGCGCGAAGCACGTGATCATTCATCGGGACGTGAAAACGACGAACATCTTGTTGGATGAGAAGTGGGTGGCGAAGGTTTCGGACTTCGGGCTATCCAAAATTGGGCCGAATGAGATGTCGAAGGCCCATGTGAGCACCGCCGTGAAAGGCAGCTTTGGATATTTGGATCCGGAGTATTTTATTCGGCAGCGGCTGACGGAGAAGTCTGACGTGTATTCTTTGGGGGTGGTGTTGTTTGAGGTACTCTGTGCTCGTTCTCCTCTGATCCATACGGAAGAAATCGAACAGGTTTCACTAGCTAAATTGGGCCAGATATTGCTACCAAAACGGGACAGTGGCGGAGATTGTGGACCCCATATTAAAGGGGAAGATCGCTCCAAAGTGTTTCGCCATGTTTTGTGA 2235 0.4953 MTFNAVIFLLLHLLPHLQGYTPLDNFTITCGSSGTSYDGQRTWTGDTESVLLTNEDATVSAKPTTLSPSTNHVPYATARLSPSQFSYSFYFNTAGPKFLRLFFFPASYPSFPRTLSSFSVHSNQFILLQDFNASLNADAENKEIIFKEYIVYVEEDQALILIFTPSQSNSYAFINGIEVLSMPSDLYYTSENDTGFTNVGSTNPFVVGKRFAMETGYRIKVGEQEISPQNDTGLFRKWAGDEERYFIKQNTGVSETYGKMNITVNPDYVAPEELYRTARNQGTNGTLNKISNLTWVFPVDCGFTYVLRLHFCELDPHINDIGDRQFFIYINSKLAEEHADVMKWSEKQKGLAVHRNYAVMIPKNDTQKKFNLSLQMHPYQSSVDTTYSDAFINGLEIFKMSDTRSNSLAGPNPDQIKTPQQKGSNRRRMIGITAGIVSGVVFISLVVFFVLFSTTSKWTPLLFPTTKSTNDHNFSLPSDQCRRFSLVEIKAATKNFDNTFIVGDGGFGHVYKGFIEDGSIPVAIKRLRQGSQQGACEFVNEIQMLSQLRHRHLVSLIGYCCDNKEMIIVYDFMGRGNLRDHLYGTDNPSLSWKERLKICIGAARGLRYLHSGAKHVIIHRDVKTTNILLDEKWVAKVSDFGLSKIGPNEMSKAHVSTAVKGSFGYLDPEYFIRQRLTEKSDVYSLGVVLFEVLCARSPLIHTEEIEQVSLAKLGQILLPKRDSGGDCGPHIKGEDRSKVFRHVL* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0426 744 Pfam Malectin-like domain 28 400 IPR024788 -
Pvu4g0426 744 Gene3D Transferase(Phosphotransferase) domain 1 573 738 - -
Pvu4g0426 744 SUPERFAMILY Protein kinase-like (PK-like) 469 720 IPR011009 -
Pvu4g0426 744 Gene3D - 25 183 - -
Pvu4g0426 744 Gene3D - 211 402 - -
Pvu4g0426 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Pvu4g0426 744 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 18 713 - -
Pvu4g0426 744 Pfam Protein tyrosine and serine/threonine kinase 502 709 IPR001245 GO:0004672|GO:0006468
Pvu4g0426 744 PANTHER OS07G0166700 PROTEIN 18 713 IPR045272 GO:0004714|GO:0006468
Pvu4g0426 744 MobiDBLite consensus disorder prediction 404 424 - -
Pvu4g0426 744 Gene3D Phosphorylase Kinase; domain 1 461 572 - -
Pvu4g0426 744 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Pvu4g0426 744 ProSiteProfiles Protein kinase domain profile. 496 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0426 744 SMART serkin_6 496 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0426 Pvu-Chr4 4352320 4355110 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0426 20 741 Receptor kinase-like Gene Family AT3G51550 46.084 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu4g0426 Malectin_like 2.3e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0426 - - vra:106770147 981.089