Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0425 ATGGCTCCTTTTCCCTGTCTTCCATTTTTCACCACCACAAAATCCAAAACCACAAGCAACTGTATCCCAATAGAACAATTCTGTCACCGCTTCTCTCTTGCTGAGCTTCAAGCAGCCACAAATGGGTTCAAGCCCAGTTTAATCGTCAGTGAAGAAGGTCAATGTCAGGTCTACAAAGGCCACCTCAAAGGCCATGGAGACGTAGCCATCAAGCACTTCAAGACTAGAAGCCCAGCTTACGATATAGAATTCAGGGTCGAAGTCAAGATTCTGTGCCAACTACACCACCCAAATATTGTTCCTTTGGTTGGTTTCTGTGAGCACAAAAATGACAAGTTTGTTGTGTATGATTATGTCTCCAATGGAAGCCTCTACGATTGCTTGCATGGCACCAACAATAATGGTGGTGTTCCCTTGTCATGGATACAAAGACTTAACATCTGCATCGGGGTGGCTCGTGGACTGCACTACATTTACTTCGAAACCAAGATACCTATCATGCACCGTGCTGTGAAATCAAGCAATGTTCTTTTGGACCATAATTTGGTGCCTAAAGTGGCAGATTTTGGACTTTGCAAGAAGCACCCCCAAGAGGAGTCAAGGCCAAAGCCACCAAGAGTTGAGTTGAGGGAGAACTTGGAGGTTAGTTTGGAATACTTGGAGCCGGAGTATTTTATGACTGCAAGGTTATCAGACAAATCTGATGTGTACTCTTTTGGGGTGGTAATGTTAGAGATTTTGTGTAGGAAGAAAGCATGTTTTTTAACCCCAAGTGGAGATTGTGAGTACCTTGTTAAGTGGGCATTTGATGATGAAAGGAAGGGGGTTTTTGAGAAGATTGTTGATCCATCTCTTATTGGAAAAATAGCACCTGCTTGTTGGGAAGTGTTCATTGAGATTGTTCAGAGATGTTTGGCTTCAGTTGAAGAGAGGCCAACAATGGGTGAAGTGACGATGGTTCTTGAAAATGCATTTCTGTTGCAGAGAGAGCAGATGTGTGAAGGAGTGTAA 1011 0.4342 MAPFPCLPFFTTTKSKTTSNCIPIEQFCHRFSLAELQAATNGFKPSLIVSEEGQCQVYKGHLKGHGDVAIKHFKTRSPAYDIEFRVEVKILCQLHHPNIVPLVGFCEHKNDKFVVYDYVSNGSLYDCLHGTNNNGGVPLSWIQRLNICIGVARGLHYIYFETKIPIMHRAVKSSNVLLDHNLVPKVADFGLCKKHPQEESRPKPPRVELRENLEVSLEYLEPEYFMTARLSDKSDVYSFGVVMLEILCRKKACFLTPSGDCEYLVKWAFDDERKGVFEKIVDPSLIGKIAPACWEVFIEIVQRCLASVEERPTMGEVTMVLENAFLLQREQMCEGV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0425 336 Gene3D Transferase(Phosphotransferase) domain 1 119 333 - -
Pvu4g0425 336 PANTHER OS07G0166700 PROTEIN 20 329 IPR045272 GO:0004714|GO:0006468
Pvu4g0425 336 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 20 329 - -
Pvu4g0425 336 ProSiteProfiles Protein kinase domain profile. 43 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0425 336 Pfam Protein tyrosine and serine/threonine kinase 56 318 IPR001245 GO:0004672|GO:0006468
Pvu4g0425 336 Gene3D Phosphorylase Kinase; domain 1 9 118 - -
Pvu4g0425 336 SUPERFAMILY Protein kinase-like (PK-like) 15 319 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0425 Pvu-Chr4 4344039 4345049 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0425 28 335 Receptor kinase-like Gene Family AT5G59700 41.748 3.31e-72 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu4g0425 PK_Tyr_Ser-Thr 1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0425 - - var:108344519 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0425 4 4344039 4345049 Pvu8g0317 8 2556622 2557557 PCT