Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0422 ATGCAAACCATGACCATCTCCACATTCACTTTCTCCTTAACACTCTTCTTCTTCCTTCTACACTTCTCCCTACACCTCCACGCCTACACCCCGGAGGAAATTTTCACCATCAGTTGCGGCACCACCGGGAAGTCCTCCGACGGTCAAAGAAGGTGGACCGGCGACGAAGACACAAAGTACTTATCTTTCAAAGACGGCTCCGTTTCAGAGAAGGCAACAACACAGTCTCCTTCCACCAATCAAATCCCCTATTCCACTGCACGCTTGTCCCGTTCCCAATTCAACTACTCCTTCCCCGTCTCCCCAGGCCCCAAATTCCTTCGCCTCTTCTTCTACCCTGCCGACTACCCTAACTTTCCCCGGAACCAAGCTTCTTTCACCGTTCAATCCAACCAATTCACTCTCCTCCACGCTTTCAACGCCTCTCTTAACGCCGACGCTCAAGCCACTGAGACTATCTTCCGAGAATACGTGGTCAACGTCAACGACGGTGAGGGGCTTATCCTCACCTTCACTCCCTCCAATTCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAACCGATTTATATTACACTCCACAAGATGATACAGGAGTCAAGCTAGTGGGACATGGTACGCAATTCAACGTTCTAACCAGCTTCGCGCTCCAGACTGAGTATAGAATCAAATCTGGGGGCCAAGAAATCCCGCCACAAAACGACACCGGTTTGCTCAGGGATTGGGCTCACGAAGAAGCTTTTTTTATTAAAGAAAATCCACAGAATAATGATCTATCAGCTGACATCGATGGGAAGATGAACATAACCGTGAATCCTGATTACGTGGCACCGAAGGAACTGTTCAGAACAGCGCGTAACCAGGGCACAAACGGCACTCTGAACCAAATGAGCAACCTGACTTGGGTGTTCCCCGTTGATTGTGGCTTCACTTACGTTCTCAGACTCCACTTTTGCGAGCTTGATCCTCTTATCAATGACATCGGTGACAGACAATTCTTCATTTACATAAATAGCCAGTTGGCTCAAGATCGTGCAGACGTAATGAAATGGAGTGCGAAACGAAAAGGCCTAGCTGTGCACAGAAACTACGCCGTAATGATTCCCATGAATGGTACTCAGAAAAAGTTTAATCTCTCGCTTCAAATGCATCCTTACGAAAGCAGTGTGGATACGGATTACAGCGACGCCTTCCTGAACGGTCTCGAGATCTTCAAAATCAGCGAAGCCGGTTCAAACAACCTCGCCGGACCTAACCCGGACCCGGTTCAGACTCCACAGAACAACAATCCCGTCCAAAAAGGAAAGTCGAGCAGCAGAAGTGCAACGACGATAATTGGCATAGTAGCAGGGGTGGTGTCTGGCGTCGTTTTGATCTCGCTGATCTTTTTCCTTGTCGTGTGTTTCCGACGCAAGAGAACCACACAGCCAAAAGATTACAAAAATTCAAAGTCTTCCGGGACTTCCAAGTGGGGTCCACTCTCCTTCGCAACGACCAAGTCAACCAACACAAACTCCTCTCTACCGTCCGATCTCTGCCGCCACTTCTCCCTCGCGGAGATCAAAGCCGCCACCAACAACTTCGACGAAGTCTTCATCATCGGAGTCGGGGGATTCGGCCACGTGTACAAGGGCTACACCGACGGCGGTTCCACTCCGGTGGCCATCAAGCGTCTGAAACCGGGTTCGCAGCAGGGTGCGCACGAGTTCATGAACGAGATCGAGATGCTCTCGCAGCTCCGCCATCTTCATCTCGTGTCCCTAATCGGATTCTGCAACGAGATGAACGAGATGATCCTGGTGTACGACTTCATGGCGCGTGGCACCCTACGCGACCATCTCTACAACACGGACAACCCCGCCATCCCGTGGAAGCAGCGGTTGCAGATCTGCATCGGCGCCGCGCGTGGACTCCACTACCTCCACACTGGCGCGAAGCACACGATCATCCACCGCGACGTGAAAACCACGAACATCTTGTTGGATGATAAGTGGGTGGCCAAGGTGTCGGACTTCGGACTTTCCAGAATCGGACCAACGGGTATGGACAAGGCTCATGTCAGCACCGTGGTGAAGGGCAGCATGGGATACCTAGACCCAGAGTATTACAAACGACAGCGTTTGACGGAAAAGTCTGACGTGTACTCTTTCGGTGTGGTGCTGTTCGAGTTACTCTGCGCCCGTCCGCCTCTGATCCGAACGGCGGAGAAAAAACAGGTGTTACTGGCTGAATGGGCAAGACACTGTTACCAAAACGGTACCATTGCACAGATTGTTGACCCGGCATTGAAGGGTAGGATCGCAGCTGAGTGCTTGAAGAAGTTCTGCGAAATTGGGGTGAGTTGCTTGTTGGACGACGGAACGCAGAGGCCGTCGATGAACGACGTCGTTTGGATGCTGGAGTTTGCCTTGCAGCTACAAGAGAGTGCAGAACAGAGGGAAAATGCTAACGTTGTGGGTGGCGAAAGGGTGAATGAAAGAAGAGATGAAGGTATGGAGGATTTGTTTAGCAGTGGAACGAGTGTGGGCCAGGTTTCTGATTTTAACAAGAGTAGTGGAACGAGTGTGGTGAGTGTTAGCAGCAGTAGCGGAGAGTACAAAGAGAGTGATAGAATGATGTCTGGAACTGTTTTCTCTGAAATTGTTGACCCAAAGCCACGTTGA 2676 0.5078 MQTMTISTFTFSLTLFFFLLHFSLHLHAYTPEEIFTISCGTTGKSSDGQRRWTGDEDTKYLSFKDGSVSEKATTQSPSTNQIPYSTARLSRSQFNYSFPVSPGPKFLRLFFYPADYPNFPRNQASFTVQSNQFTLLHAFNASLNADAQATETIFREYVVNVNDGEGLILTFTPSNSNSYAFINGIEVLSMPTDLYYTPQDDTGVKLVGHGTQFNVLTSFALQTEYRIKSGGQEIPPQNDTGLLRDWAHEEAFFIKENPQNNDLSADIDGKMNITVNPDYVAPKELFRTARNQGTNGTLNQMSNLTWVFPVDCGFTYVLRLHFCELDPLINDIGDRQFFIYINSQLAQDRADVMKWSAKRKGLAVHRNYAVMIPMNGTQKKFNLSLQMHPYESSVDTDYSDAFLNGLEIFKISEAGSNNLAGPNPDPVQTPQNNNPVQKGKSSSRSATTIIGIVAGVVSGVVLISLIFFLVVCFRRKRTTQPKDYKNSKSSGTSKWGPLSFATTKSTNTNSSLPSDLCRHFSLAEIKAATNNFDEVFIIGVGGFGHVYKGYTDGGSTPVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGFCNEMNEMILVYDFMARGTLRDHLYNTDNPAIPWKQRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTGMDKAHVSTVVKGSMGYLDPEYYKRQRLTEKSDVYSFGVVLFELLCARPPLIRTAEKKQVLLAEWARHCYQNGTIAQIVDPALKGRIAAECLKKFCEIGVSCLLDDGTQRPSMNDVVWMLEFALQLQESAEQRENANVVGGERVNERRDEGMEDLFSSGTSVGQVSDFNKSSGTSVVSVSSSSGEYKESDRMMSGTVFSEIVDPKPR* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0422 891 Pfam Protein tyrosine and serine/threonine kinase 538 802 IPR001245 GO:0004672|GO:0006468
Pvu4g0422 891 ProSitePatterns Protein kinases ATP-binding region signature. 538 561 IPR017441 GO:0005524
Pvu4g0422 891 SMART serkin_6 532 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0422 891 ProSiteProfiles Protein kinase domain profile. 532 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0422 891 MobiDBLite consensus disorder prediction 841 873 - -
Pvu4g0422 891 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 18 817 - -
Pvu4g0422 891 PANTHER OS07G0166700 PROTEIN 18 817 IPR045272 GO:0004714|GO:0006468
Pvu4g0422 891 Gene3D Phosphorylase Kinase; domain 1 497 608 - -
Pvu4g0422 891 SUPERFAMILY Protein kinase-like (PK-like) 507 807 IPR011009 -
Pvu4g0422 891 Gene3D - 31 191 - -
Pvu4g0422 891 Gene3D - 220 412 - -
Pvu4g0422 891 Pfam Malectin-like domain 37 411 IPR024788 -
Pvu4g0422 891 MobiDBLite consensus disorder prediction 419 442 - -
Pvu4g0422 891 MobiDBLite consensus disorder prediction 839 875 - -
Pvu4g0422 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Pvu4g0422 891 Gene3D Transferase(Phosphotransferase) domain 1 609 831 - -
Pvu4g0422 891 CDD STKc_IRAK 538 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0422 Pvu-Chr4 4330331 4333268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0422 29 891 Receptor kinase-like Gene Family AT3G51550 49.551 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu4g0422 Malectin_like 6.4e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0422 - - gsj:114381619 1328.92