Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0412 ATGTCTAAAAAGGTTTTCACATCAATGAAGGATGAAAATCCAGACTTGCAGAAGCAAATTGGGTGCATCAGTGGATTTTTTCAGCTCTTTGACCGCCACAGGTTCCTCACAGGTAGCAGCCACAGTCAGAACATACCAACTAAAGGTGGAACAAGGAACCAAGTGAAAGAGGTGAATAATACAAATCAAAAGGCAACGGGAAACATTAATGTGAAGGTTGCAAGAGAGAATCAGCAATTCTCCACAGAATCATCAGGAACTTCAATGTCTTCATCCTCTCGTTCATCTAGCATGTCATCCCTTGAGTTCAGTAGAACAATTCAGATAGAAGCACCACCAATCAGTCCAATGAAAATTCCAGAGAACTGTAATTCAGAAATAGCATTGAAGCAACATGGCAACCGAGGCTCTCAGTCCCTTGATCTCTATGATATTGTCAAAGAGTCAATGCATAGAGATGTTCAGGGATTGTCAGTAAAAACTGTGGCTAAAGAGGAAAAGAAGGGTAGAATCTTGAAACACGTTGACTCTCCCAGGCCTTTGGAGCCCCCAAAACCTGTCAATATGGTTGCTTGGGATTCCCCCAGACTCTCTTATGATGGGAGGGACACACAAGATACATTAAAATCTGCTACAAAGCCTAAGGAACTCCCCAGGCTTTCCTTGGACAGCAGAGAAGGATCCATCAAAAGCTTCAATGAAGGAACAAAATGTCGCGGCCTTCTGAAGGGTCTACAGAAAGGGTATAGTAGCTCGGGCACAATGCTTAAGCAGCTGCAGGAACCAGAAACTTCTAGAAGATCATCCAGTGTTGTAGCAAGGTTGATGGGACTAGAAACCTTCCAAGAATGCACAGAAACTTGTTGTGATACTCAACAAAGGATCTGTACAAGCAAAAATGAATCAAATTCAGAACCTAGCACAAATGATGAGTACAAGCAACACCAAAATGTTGTATCATTGAAGGGATCTACCTTGCTTCAGTTTAGGAGGGATGCTTCAATCCTAAATGTGACTCCTTATTCACGGTTTTCCCTAGAACCAACTCTGTGGAGGCAGCCCGAAGCAAGTCAAGGTTCTCAATTACAAACTTCCAAGAGAAGTGAATCTTCAGCAAAAGCATCAAACCAATCGCTCTCGGTATACGGGGAAATTGAAAAGAGGATAGCAGATATAGAGTTCAAAAATTCTGGAAAGGATCTCAGAGCGCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTACATATTACAAGGGATCAGGCTTCAAATTCTCTATCTGACAATAGGAGTAATAGCAGTCTTAGTGAAAGCTCGATAGTCAAAAGCCCAAGAATACGGCAGAAGGACCCAACATCCACCACTGTTGACATTTCAAATTCACCAATTTTCATAATGAAACCAGCAAAATCTGCAAGACAAACCAGCAAGTTTAGTCCTGCTAATCCTGTTAATGGAGTAATGGGTGGCAAACTTGACAGGAAAACAGCAAAGGGTATCAGTCCAGCAATCAGACATGCCAAGGATTCCATTGGTCAACCCTTCCACTCGGTGGACAAGAGTAACAATAAGATGAGAACATCAAAATTGTTGCAATCCCCAAAAGTTCCTCAAGTGATCCATGGGGAAAATGCCACCAACTCCAGCAATGCAACAGGGGCCAAGAGCCCGAGACTGCAAAAGAAGTTTGGTTTGGAGAGGCGCTCACCAACAACAAGCCCATCATCAGATTCAAGCAGTAACAGAAGACAACACAATAGGCAATCTGTGGAATTGTCTTCCCCAAGTACTACACCCAGACAAAAATCCAGTGAGACCAAAAACCAAAGGGGGGGTTTTAAGCATGAAGTTGGCGTAGAAGTCATTCACATGGATCATTCTGATAGGATCAACAGCAACTGCATCCAGTTAAAGGGCTTGAATCAAAATAATTCAGCAAATGATTTGAGCAAAGAAAGCTTTCAAGCTGAGAAAATAATTACAGCAGAACAACCAAGCCCTGTGTCTGTTCTTGATGCTGCTTTCTACAGTGAAGAACCACCTTCTCCAGTTAAAAAGAAATCAGACATCACAAAAGATTTAGATGATGCTCTTAACACTTATGATAGCAGCGAGGAGAACTCAGAAGATCTTCTTCTTTTATCCAACAATGCAAAAGCAAACTTCAGCAGTAGAACCAGTGATACTGACTTGAGAACTCCAAATTTGGTTCAAATTCTCCATCAAATTGACTCAAATGATGAGATATTTACCAATTTCAGAGACTATAAAGATCCTGACCATAAATATATATCAGAAATACTGTTAGCATCAGGATTGCTCAGCAGTCCAAGCTCTAGCTACGGTTTTCATTCATCAAGTCAGCCCATAAACCCAAAGTTGTTCCTTGTACTAGAGCAAATCAAGACAAACAAAAAGTGTTTCAAAATTGAATACAATGCCAAGAAAATTGCTGGGCTGAATAGTCCTGACCAAACGCAAAGACAGCTAATATTTGATGTCGTTAATGACATTCTAGCTCAGAAAATAATATTGGAAAGTTCTACTCCGTGGTGCCAGTCAAATCAGCCAATAAGTAGAACAGTACGAGGACAGCTGCTTTTGGATGAGCTTTGCACAGAAATTGATAAGTTACAACATAAACATAGGAATGTCAACCTGGTTAATGAGGATGAGAATATGAGAAGCCTCTTGTGGGAAGAGTTGATGCACTGTCCCACAATTTACACAAACAGTTACATGGAAATTCCAAATGTTGTGTTGGATATTGAACGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGAAGTAGCTAACCATTCTGGTAAGCACTGCAAACAACTGCTGTTTTCCAAGTAG 2877 0.4084 MSKKVFTSMKDENPDLQKQIGCISGFFQLFDRHRFLTGSSHSQNIPTKGGTRNQVKEVNNTNQKATGNINVKVARENQQFSTESSGTSMSSSSRSSSMSSLEFSRTIQIEAPPISPMKIPENCNSEIALKQHGNRGSQSLDLYDIVKESMHRDVQGLSVKTVAKEEKKGRILKHVDSPRPLEPPKPVNMVAWDSPRLSYDGRDTQDTLKSATKPKELPRLSLDSREGSIKSFNEGTKCRGLLKGLQKGYSSSGTMLKQLQEPETSRRSSSVVARLMGLETFQECTETCCDTQQRICTSKNESNSEPSTNDEYKQHQNVVSLKGSTLLQFRRDASILNVTPYSRFSLEPTLWRQPEASQGSQLQTSKRSESSAKASNQSLSVYGEIEKRIADIEFKNSGKDLRALKQILDAMQRYKESLHITRDQASNSLSDNRSNSSLSESSIVKSPRIRQKDPTSTTVDISNSPIFIMKPAKSARQTSKFSPANPVNGVMGGKLDRKTAKGISPAIRHAKDSIGQPFHSVDKSNNKMRTSKLLQSPKVPQVIHGENATNSSNATGAKSPRLQKKFGLERRSPTTSPSSDSSSNRRQHNRQSVELSSPSTTPRQKSSETKNQRGGFKHEVGVEVIHMDHSDRINSNCIQLKGLNQNNSANDLSKESFQAEKIITAEQPSPVSVLDAAFYSEEPPSPVKKKSDITKDLDDALNTYDSSEENSEDLLLLSNNAKANFSSRTSDTDLRTPNLVQILHQIDSNDEIFTNFRDYKDPDHKYISEILLASGLLSSPSSSYGFHSSSQPINPKLFLVLEQIKTNKKCFKIEYNAKKIAGLNSPDQTQRQLIFDVVNDILAQKIILESSTPWCQSNQPISRTVRGQLLLDELCTEIDKLQHKHRNVNLVNEDENMRSLLWEELMHCPTIYTNSYMEIPNVVLDIERLIFKDLITEVVRSEVANHSGKHCKQLLFSK* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0412 958 PANTHER LONGIFOLIA PROTEIN 1 957 - -
Pvu4g0412 958 MobiDBLite consensus disorder prediction 352 377 - -
Pvu4g0412 958 PANTHER LONGIFOLIA PROTEIN 1 957 IPR033334 GO:0051513
Pvu4g0412 958 MobiDBLite consensus disorder prediction 422 464 - -
Pvu4g0412 958 MobiDBLite consensus disorder prediction 422 496 - -
Pvu4g0412 958 MobiDBLite consensus disorder prediction 76 103 - -
Pvu4g0412 958 MobiDBLite consensus disorder prediction 534 559 - -
Pvu4g0412 958 MobiDBLite consensus disorder prediction 175 213 - -
Pvu4g0412 958 MobiDBLite consensus disorder prediction 534 617 - -
Pvu4g0412 958 MobiDBLite consensus disorder prediction 569 609 - -
Pvu4g0412 958 Pfam Domain of unknown function (DUF4378) 763 937 IPR025486 -
Pvu4g0412 958 MobiDBLite consensus disorder prediction 199 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0412 Pvu-Chr4 4177901 4183020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0412 1 944 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.553 3.90e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0412 - - vra:106774015 1430.62