Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0367 ATGAGGAAGCGCCAGGTGGTTGTGAGAAGAGAGGAGCCTCAGAGAAATGTTAGGAGTGTGAAGTATGGAGAGTGCCAGAAGAATCATGCAGCAAATGTTGGAGGGTATGCTGTTGATGGTTGCAGAGAGTTCATGGCAAGTGGTGGAGAAGGGACAACTGCTGCTCTCACTTGTGCTGCATGTGGGTGCCACAGGAACTTCCACAAGAGACAGGTTGAAACTGAAGTAGTGTGTGAGTGCTCCTCACCTCCCTCCAATGGCACATGA 267 0.5056 MRKRQVVVRREEPQRNVRSVKYGECQKNHAANVGGYAVDGCREFMASGGEGTTAALTCAACGCHRNFHKRQVETEVVCECSSPPSNGT* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0367 88 PANTHER BNAA09G44460D PROTEIN 18 83 - -
Pvu4g0367 88 Pfam ZF-HD protein dimerisation region 20 72 IPR006456 -
Pvu4g0367 88 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 71 IPR006456 -
Pvu4g0367 88 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 21 71 IPR006456 -
Pvu4g0367 88 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 18 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0367 Pvu-Chr4 3706101 3707272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0367 1 87 Zinc finger-homeobox gene family AT3G28917 69.697 1.03e-42 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pvu4g0367 ZF-HD_dimer 5.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0367 - - aprc:113868039 168.318