Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0314 ATGGAGGAGAGGAATGAGATGGAAAAGATTGATGATGTTATGCCAGGATTTCGTTTTCACCCCACTGATGAAGAGCTTGTTGATTTCTATCTCAAGAGAAAAATTCAGCAGAAGTCTCTCCCTATTGAACTGATTAAGCAAGTGGATATCTACAAATATGATCCATGGGACCTTCCAAAGCTGGCAGGCACTGGAGAGAAAGAGTGGTACTTCTACTGTCCAAGGGACAGAAAATACAGGAACAGTGCACGTCCAAATAGGGTCACAAGAGCTGGATTTTGGAAGGCCACTGGAACTGACAGACCTATATATTCCTCTGATGGGAAGTGCATTGGTCTGAAGAAGTCTCTTGTGTTCTACAGAGGAAGAGCTGCCAAAGGGATGAAAACTGATTGGATGATGCATGAGTTTAGGTTGCCTTGCATTTCTGACTCAGCCCCTTCCAAAAAACTCTCAGACAAAAGCCTCCCTCCAACTGATTCATGGGCAATCTGTAGGATATTCAAGAAAACCAACTCCCTTTCCATGGCACAGAAAGCTTTATCACACCCTTGGATCTCTCAGTTGTCTGGAAGCATGGTATCTGACATGTTCACACAGGGTGCAACAAACCATCACCTAGGATCACCACCAGCCATTCAGTTTTGTGATGAGAGGCAAGAGTTACACCAAGTCTCCAACAATGACATCAACACCAACTTCACAGCTTCAGATATGCCCAATTACAAACCCATCAACAGCACCACAGCTCCCAAGCCTTCACCAGAAATTCCTGTTTCAGATGGAGACCTTGCTGACAACTTCATATTCTACACAGAACACACCAAGTGCACACTTGATGCCAGTTCCATGCTTTCTCCCAATCCTGACTACATAACATTTCAAGAGCCAAACCAACAACAGTATAGTGTCTTTTCAAACAATCTACCTCATTACATCCAACAAAACATGACCACAGAAACAGTGACAAAAGAACAACAAGATTGGGAAACAATTGGGAGAACCACTGGATTTCCCTTTACTTTGCTTCCCCCACATGATGCATGGAAGTCTTCTTCTGTGGCATGGGACTCACCTCCTTGCCCCAGTGACATGTCCACCACCTATTCCACCAATAAATGCTACACTTGA 1131 0.4412 MEERNEMEKIDDVMPGFRFHPTDEELVDFYLKRKIQQKSLPIELIKQVDIYKYDPWDLPKLAGTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSDGKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRLPCISDSAPSKKLSDKSLPPTDSWAICRIFKKTNSLSMAQKALSHPWISQLSGSMVSDMFTQGATNHHLGSPPAIQFCDERQELHQVSNNDINTNFTASDMPNYKPINSTTAPKPSPEIPVSDGDLADNFIFYTEHTKCTLDASSMLSPNPDYITFQEPNQQQYSVFSNNLPHYIQQNMTTETVTKEQQDWETIGRTTGFPFTLLPPHDAWKSSSVAWDSPPCPSDMSTTYSTNKCYT* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0314 376 SUPERFAMILY NAC domain 11 170 IPR036093 GO:0003677|GO:0006355
Pvu4g0314 376 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 374 - -
Pvu4g0314 376 PANTHER NAC DOMAIN-CONTAINING PROTEIN 94-RELATED 1 374 - -
Pvu4g0314 376 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Pvu4g0314 376 Gene3D NAC domain 22 175 IPR036093 GO:0003677|GO:0006355
Pvu4g0314 376 ProSiteProfiles NAC domain profile. 13 170 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0314 Pvu-Chr4 2993951 2997294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0314 2 186 NAC Transcription Factor Family AT5G39820 69.500 8.92e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu4g0314 NAM 3.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0314 - - gmx:100777630 637.491