Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0305 CACCTTACTTCTGAGAGCAATGTTTATAGCTTTGGGATTGTTCTGCTTGAAATGCTGACAGGAAGAAGAGCCTTGGATCAAACAATGGCTACAGAAGAACAAAACTTGGTAGAATGGTTGCGGCCTCGTCTAAAAAACAAAGCAAATTTTCATTATTTGATGGATCCTAGACTTGAAGGGCAATACCCAACAAAATGTGCTCATAGGACAATGAGGATAGCTACTCATTGTCTTCGTCTAGACCCTAAAACAAGACCCCTTATGAGTGAAGTAGTTCATAAGTTGAAGTATTTGCATGATGAGATGGTTAGTGAGGTTGGTCCCTCAACCTCACTTGGTAGAATGGATGTAGGTCCTTCAAACCATGATAGTGCTAACAAGTATGGCTTTGAAATAAGTTCATCACCAAATGTTTTAAGGTGCTTTCAAGCTTCACCACAGTGTCAATACTACCCTCTTCCTCTACCTCCACCTCCACCAAATCCTTGGCTTGGATCTTCATCTAACTCTTAA 513 0.4074 HLTSESNVYSFGIVLLEMLTGRRALDQTMATEEQNLVEWLRPRLKNKANFHYLMDPRLEGQYPTKCAHRTMRIATHCLRLDPKTRPLMSEVVHKLKYLHDEMVSEVGPSTSLGRMDVGPSNHDSANKYGFEISSSPNVLRCFQASPQCQYYPLPLPPPPPNPWLGSSSNS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0305 170 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 134 - -
Pvu4g0305 170 PANTHER OS01G0588500 PROTEIN-RELATED 1 134 - -
Pvu4g0305 170 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Pvu4g0305 170 SUPERFAMILY Protein kinase-like (PK-like) 2 103 IPR011009 -
Pvu4g0305 170 ProSiteProfiles Protein kinase domain profile. 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0305 170 Pfam Protein tyrosine and serine/threonine kinase 2 95 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0305 Pvu-Chr4 2806352 2806866 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0305 1 98 Glycoside Hydrolase AT3G07070 47.959 1.90e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu4g0305 PK_Tyr_Ser-Thr 1.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0305 - - var:108344548 253.062