Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0304 ATGAGAATGAAAATTGCAATTGGTGCTGCTAATGGCCTTGCATTTTTACACGAGGAAGCTTCAAGGCCAATAATATTTCCAGATTTTAAGACATCTAAGATCCTATTGGATATGGACTACAATGCAAAACTTTGGGACTTTGGTCTTGTTCGAGAAATTCATGTAACAACTAAAGTAGTTGTAACAAAAGGCTATGAAGCTCCTGAGTATTTGATGTCAG 220 0.3636 MRMKIAIGAANGLAFLHEEASRPIIFPDFKTSKILLDMDYNAKLWDFGLVREIHVTTKVVVTKGYEAPEYLMS 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0304 73 ProSiteProfiles Protein kinase domain profile. 1 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0304 73 Pfam Protein kinase domain 5 71 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0304 73 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 72 - -
Pvu4g0304 73 Gene3D Transferase(Phosphotransferase) domain 1 1 73 - -
Pvu4g0304 73 PANTHER OS01G0588500 PROTEIN-RELATED 1 72 - -
Pvu4g0304 73 SUPERFAMILY Protein kinase-like (PK-like) 2 72 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0304 Pvu-Chr4 2804973 2805272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0304 2 73 Receptor kinase-like Gene Family AT3G58690 51.282 2.75e-21 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu4g0304 Pkinase 4.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0304 - - pvu:PHAVU_004G0274001 149.058