Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0302 ATGAAAATTGCAATTGGTGCTGCTAATGGCATGTCATTTTTGCATGAGGAAGCTTCAAGACCATTACTATTTCGAGATTTTAAGACATCTAGTATCCTATTGGATAAGGATTACAACACAAAACTTTGGGACTTTGGTCTTGCAAAAGATGCTCCAGTGGGACATGAAATCCATGAAACAACTAAAGTGGTAGGATCAAAAGGCTATGAAGCCCCAGAGTATATGATGACAGGACACCTTACTTCGAAGAGCAATGTTTATAGCTTTGGTTTGGTTCTACTTGAACTGTTGACAGGAAGAAGAGCTATAGATCAAACAATGCCTACAGAGGAGCAAAACCTAATAGATTGGTTGAGGCCTCGTCTTAGGAACAGAGCAAATTTTCATTATTTGATGGATCCTAAACTTGAAGGCCAATACCCTACAAAATTTGCTCATAAGACAATGAGGTTAGCTATTCATTGTCTTCGCCTTGACCCAAAAGCAAGACCCCTTATGAGTGAAGTAGTTCGTGAGTTGAAGTGTTTACATGATGACATGGTTGGTGCCTCCACCTCATCTCCCTCAGCCTCACTTGGGAGAATTCATATAGGTCCATTCAACCATCTTGGTGCTTGCAAGTATGACCTTGGAATAGGTTCATCATCAAATTTCCGAAGGTGCTTTCAACACTTTCCACAGTGCCAAGACTATCCTCTACCCTTACCTCCATCTCCACCAAATCCAATAGTTACATCTTCATCAAATCCTAAGTTGGAACTTCATCCAACTTAG 774 0.4057 MKIAIGAANGMSFLHEEASRPLLFRDFKTSSILLDKDYNTKLWDFGLAKDAPVGHEIHETTKVVGSKGYEAPEYMMTGHLTSKSNVYSFGLVLLELLTGRRAIDQTMPTEEQNLIDWLRPRLRNRANFHYLMDPKLEGQYPTKFAHKTMRLAIHCLRLDPKARPLMSEVVRELKCLHDDMVGASTSSPSASLGRIHIGPFNHLGACKYDLGIGSSSNFRRCFQHFPQCQDYPLPLPPSPPNPIVTSSSNPKLELHPT* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0302 257 Pfam Protein kinase domain 5 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0302 257 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0302 257 MobiDBLite consensus disorder prediction 236 257 - -
Pvu4g0302 257 Gene3D Transferase(Phosphotransferase) domain 1 1 187 - -
Pvu4g0302 257 PANTHER OS01G0588500 PROTEIN-RELATED 1 189 - -
Pvu4g0302 257 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 189 - -
Pvu4g0302 257 SUPERFAMILY Protein kinase-like (PK-like) 2 176 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0302 Pvu-Chr4 2753894 2756666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0302 1 176 Glycoside Hydrolase AT3G07070 50.568 3.23e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu4g0302 Pkinase 2.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0302 - - pvu:PHAVU_004G027200g 511.146