LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu4g0284	ATGGAGATATCGCAAGCGATGGACGCTCTGCGTCAAAGAGCGACGTTCGTGAAGGAGTCACTTCACAAGAGCCAGACCATCACCGATAACATGGTCTCCATTCTCGGCTCCTTCGATCATCGTCTCTCCGCCCTCGAAACCGCCATGCGTCCCACTCAGATAAAAACGCATTCAATTCGTAGTGCACATGATAATATTGACAAGACTCTAAAAGCAGCAGAGGGCATTTTGACGCAATTCGACCAGACACGAATGGCGGAGGCTAAAATACTTCGAGGGCCGCATGAGGATCTTGAAAGCTATTTAGGAGCAGTTGATCAGTTGAGGGCAAATATTCGTTTCTTTACTAGTAAAAAGAGCTTCAAATGCAGTGAGACTGTCATCAACCATGCTAATAGCTTGCTTACCAAAGCTATCTCAAAGTTAGAAGAGGAATTCAAACACCTTTTGACAAATTATAGTAAACCTGTGGAACCTGATCGCCTTTTTGAGTGCCTCCCAAACTCTCTAAGGCCCTCAAATTCTGGGAAGCATGGTGAGGGTGGTGGAAAAAACCATTCTCGAAAACAAAGTTCAGAAGGTGTCGCTTTCGCCCTTCCAACTCTCATTCCACCAAGAGTCATACCTTTGCTACATGATTTAGCACAGCAAATGGTTCAAGCTGGCCATCAACAACAACTTTTTCGAATCTACAGAGATACCCGAGCTACAGTCCTGGAACAAAGTCTTAGGAAGTTAGGTGTCGAAAGGTTGAGTAAGGATGATGTTCAAAAAATGCAATGGGAGGTTTTGGAGGCAAAGATTGGGAATTGGATTCATTATATGAGGATTGCTATCAAATTGCTGATTTCTGGAGAGAAGAAAATTTGTGATCAAATATTTGATGGCGTGGACTCTTTGAAATCTCAATGTTTTGCTGAAGTCACTGCTGGTAGTGTGGCTATGCTTCTTAGTTTTGGAGAGGCTATTGCAAAAAGCAAGAGGTCACCTGAGAAATTATTTGTTCTTCTAGACATGTATGAGATCATGAGAGAGCTTCAACCAGAGGTTGAGATGCTTTTTGAAAGTAAAGTATGCACTGAAATGAGAGAAGCTGCAATAAATTTGTCAAAGAGATTAGCTCAAACTGCCCTAGAAACCTTTGTTGATTTTGAGGAAGCAGTTGAAAAAGATGCCACTAAAACTACTGTAATGGATGGAACTGTCCACCCTTTAACCAGCTACGTGATCAATTACGTAAAGTTTCTATATGATTATCAATCAACCTTGAAACAACTTTTTCATGAGTTTGATCCCAATGATCCGGAAGGACAATTAGCAATTATTACAACAAGGATTATGCAGGCTCTCCAAAGTAACTTGGATGGAAAATCAAAACAATATAAAGATCCAGCATTGACCCAGTTGTTTCTTATGAATAACATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGACATGTTAGGGGATGATTGGGTGCAAATACATAGAAGAATTGTGCAACAACATGCAAATCAGTATAAAAGGATTTCTTGGGCAAAGATTTTACAATGCCTCACTGTCCCAGGAGGGGACAACAATAGTGGAGTCTCAAGAACAATGATTAAAGATAGATTCAAGACATTTAACGATCAAATTGAAGAGATTCATCAAAGGCAATCTCAATGGACTGTTCCTGACAGTGAATTGCGTGAATCTCTTAGATTGGCTGTTGCTGAAGTCTTGTTGCCTGCATATAGATCTTTCCTTAAACGTTTTGGGCCCGTGATAGAGAATGGCAAAAATCCTTATAAGTACATGGTATATTCTCCCGAACATCTTGAGCAAATGCTAGGTGAATTTTTTGAAAGCAAGATATGGGGTGAACCAAAGCGATAA	1887	0.4065	MEISQAMDALRQRATFVKESLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEGILTQFDQTRMAEAKILRGPHEDLESYLGAVDQLRANIRFFTSKKSFKCSETVINHANSLLTKAISKLEEEFKHLLTNYSKPVEPDRLFECLPNSLRPSNSGKHGEGGGKNHSRKQSSEGVAFALPTLIPPRVIPLLHDLAQQMVQAGHQQQLFRIYRDTRATVLEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAIKLLISGEKKICDQIFDGVDSLKSQCFAEVTAGSVAMLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQPEVEMLFESKVCTEMREAAINLSKRLAQTALETFVDFEEAVEKDATKTTVMDGTVHPLTSYVINYVKFLYDYQSTLKQLFHEFDPNDPEGQLAIITTRIMQALQSNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVPGGDNNSGVSRTMIKDRFKTFNDQIEEIHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPVIENGKNPYKYMVYSPEHLEQMLGEFFESKIWGEPKR*	629

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu4g0284	628	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	36	623	IPR004140	GO:0000145\|GO:0006887
	Pvu4g0284	628	Pfam	Exo70 exocyst complex subunit	270	615	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Pvu4g0284	628	MobiDBLite	consensus disorder prediction	166	190	-	-
	Pvu4g0284	628	Gene3D	Exocyst complex component Exo70	75	628	-	-
	Pvu4g0284	628	PANTHER	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	36	623	-	-
	Pvu4g0284	628	SUPERFAMILY	Cullin repeat-like	76	619	IPR016159	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu4g0284	Pvu-Chr4	2562839	2569853	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu4g0284	1	628	EXO70 exocyst subunit family	AT5G52340	77.215	0.0	1016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu4g0284	K07195		-	gmx:100779774	1169.07

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu4g0284	4	2562839	2569853	Pvu4g0284	4	2562839	2569853	ECH

Showing 1 to 1 of 1 entries