Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0284 ATGGAGATATCGCAAGCGATGGACGCTCTGCGTCAAAGAGCGACGTTCGTGAAGGAGTCACTTCACAAGAGCCAGACCATCACCGATAACATGGTCTCCATTCTCGGCTCCTTCGATCATCGTCTCTCCGCCCTCGAAACCGCCATGCGTCCCACTCAGATAAAAACGCATTCAATTCGTAGTGCACATGATAATATTGACAAGACTCTAAAAGCAGCAGAGGGCATTTTGACGCAATTCGACCAGACACGAATGGCGGAGGCTAAAATACTTCGAGGGCCGCATGAGGATCTTGAAAGCTATTTAGGAGCAGTTGATCAGTTGAGGGCAAATATTCGTTTCTTTACTAGTAAAAAGAGCTTCAAATGCAGTGAGACTGTCATCAACCATGCTAATAGCTTGCTTACCAAAGCTATCTCAAAGTTAGAAGAGGAATTCAAACACCTTTTGACAAATTATAGTAAACCTGTGGAACCTGATCGCCTTTTTGAGTGCCTCCCAAACTCTCTAAGGCCCTCAAATTCTGGGAAGCATGGTGAGGGTGGTGGAAAAAACCATTCTCGAAAACAAAGTTCAGAAGGTGTCGCTTTCGCCCTTCCAACTCTCATTCCACCAAGAGTCATACCTTTGCTACATGATTTAGCACAGCAAATGGTTCAAGCTGGCCATCAACAACAACTTTTTCGAATCTACAGAGATACCCGAGCTACAGTCCTGGAACAAAGTCTTAGGAAGTTAGGTGTCGAAAGGTTGAGTAAGGATGATGTTCAAAAAATGCAATGGGAGGTTTTGGAGGCAAAGATTGGGAATTGGATTCATTATATGAGGATTGCTATCAAATTGCTGATTTCTGGAGAGAAGAAAATTTGTGATCAAATATTTGATGGCGTGGACTCTTTGAAATCTCAATGTTTTGCTGAAGTCACTGCTGGTAGTGTGGCTATGCTTCTTAGTTTTGGAGAGGCTATTGCAAAAAGCAAGAGGTCACCTGAGAAATTATTTGTTCTTCTAGACATGTATGAGATCATGAGAGAGCTTCAACCAGAGGTTGAGATGCTTTTTGAAAGTAAAGTATGCACTGAAATGAGAGAAGCTGCAATAAATTTGTCAAAGAGATTAGCTCAAACTGCCCTAGAAACCTTTGTTGATTTTGAGGAAGCAGTTGAAAAAGATGCCACTAAAACTACTGTAATGGATGGAACTGTCCACCCTTTAACCAGCTACGTGATCAATTACGTAAAGTTTCTATATGATTATCAATCAACCTTGAAACAACTTTTTCATGAGTTTGATCCCAATGATCCGGAAGGACAATTAGCAATTATTACAACAAGGATTATGCAGGCTCTCCAAAGTAACTTGGATGGAAAATCAAAACAATATAAAGATCCAGCATTGACCCAGTTGTTTCTTATGAATAACATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGACATGTTAGGGGATGATTGGGTGCAAATACATAGAAGAATTGTGCAACAACATGCAAATCAGTATAAAAGGATTTCTTGGGCAAAGATTTTACAATGCCTCACTGTCCCAGGAGGGGACAACAATAGTGGAGTCTCAAGAACAATGATTAAAGATAGATTCAAGACATTTAACGATCAAATTGAAGAGATTCATCAAAGGCAATCTCAATGGACTGTTCCTGACAGTGAATTGCGTGAATCTCTTAGATTGGCTGTTGCTGAAGTCTTGTTGCCTGCATATAGATCTTTCCTTAAACGTTTTGGGCCCGTGATAGAGAATGGCAAAAATCCTTATAAGTACATGGTATATTCTCCCGAACATCTTGAGCAAATGCTAGGTGAATTTTTTGAAAGCAAGATATGGGGTGAACCAAAGCGATAA 1887 0.4065 MEISQAMDALRQRATFVKESLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEGILTQFDQTRMAEAKILRGPHEDLESYLGAVDQLRANIRFFTSKKSFKCSETVINHANSLLTKAISKLEEEFKHLLTNYSKPVEPDRLFECLPNSLRPSNSGKHGEGGGKNHSRKQSSEGVAFALPTLIPPRVIPLLHDLAQQMVQAGHQQQLFRIYRDTRATVLEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAIKLLISGEKKICDQIFDGVDSLKSQCFAEVTAGSVAMLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQPEVEMLFESKVCTEMREAAINLSKRLAQTALETFVDFEEAVEKDATKTTVMDGTVHPLTSYVINYVKFLYDYQSTLKQLFHEFDPNDPEGQLAIITTRIMQALQSNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVPGGDNNSGVSRTMIKDRFKTFNDQIEEIHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPVIENGKNPYKYMVYSPEHLEQMLGEFFESKIWGEPKR* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0284 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 623 IPR004140 GO:0000145|GO:0006887
Pvu4g0284 628 Pfam Exo70 exocyst complex subunit 270 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pvu4g0284 628 MobiDBLite consensus disorder prediction 166 190 - -
Pvu4g0284 628 Gene3D Exocyst complex component Exo70 75 628 - -
Pvu4g0284 628 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 623 - -
Pvu4g0284 628 SUPERFAMILY Cullin repeat-like 76 619 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0284 Pvu-Chr4 2562839 2569853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0284 1 628 EXO70 exocyst subunit family AT5G52340 77.215 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0284 K07195 - gmx:100779774 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0284 4 2562839 2569853 Pvu4g0284 4 2562839 2569853 ECH