Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0267 ATGGATCGCAGGAACACGTTTTCCTCTTCCTTCCTTATTCTGACCCTGTTGGGGTTTCACGTGTTCCTCGGCTCTTCGCAGGTCGAGGAGGACGACGTTAAATGTCTCCGTGGCATCAAAGAAGCTCTGTCGGATCCGCAGGGCCACCTCGACCTGTGGCGGTTCGAGAACACCACCGTGGGTTTCATCTGCGACTTCGTGGGTGTGACTTGCTGGAACCAAAGGGAGAACCGGGTCTTGAGTTTGGACTTCCAAGATTTCAAACTTTCGGGTCGGATCCCCGAGGCTATGAAGTACTGTGGGAAGAGCCTTCAGAGGTTGAATCTTGCTTCAAACTCTTTCTCCTTCGAGATCCCACACGAGATCTGTACTTGGATGCCGTTTTTGGTTTCTCTAGATTTGTCTGGTAATCAACTCTCTGGGTCTATTCCTCCCACACTTGCGAATTGTTCATATTTGAATGAGTTGATGTTGTCAGATAATCAGCTTTCTGGGTCAATCCCCTTTGAGTTGGGGAGTTTGAGTAGGCTCAAGAAGTTTTCTGTGGCCAATAATAGGCTTAGTGGGACAATTCCTGAGTTTTTCCATGGGTTTGAAAGGGAGGGCTTTGAGGGGAATAGTGGGTTATGTGGGGGTCCTCTTGGATCCAAGTGTGGTGGGATGAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGGGTGTTTGGTGCTGCTGCTTCGTTGTTGCTGGCTTTTGGCCTGTGGTGGTGGTACCATTTGAGTGGGAAGAGGAAGAAGAAGGGGTATGGGGTTGGTTCCACCGTGGGTGCTGCTGGTGATTGGGCTTTGAGGCTAAGAGGGTATAAGCTTGTGCAAGTTAGTCTCTTTCAGAAGCCTATTGTGAAGGTGAAGTTGGGGGATTTGATGGCTGCTACAAACAATTTCAGTGGGGAGAATGTTCTTTTTGCAACAAGAACCGGGACAACGTACAAGGCTGATCTCCCAGATGGTTCCACGCTAGCAGTGAAGAGGCTGAATGCTTGTAGGATTGGGGAGAAGCAGTTTGGGATGGAGATGAACCGGTTGGGGCAGGTTAGGCACCCGAATCTGGCTCCTCTGTTGGGGTACTGTGTGGTGGAGGAGGAGAAGTTGCTGGTTTACAAGCACATGTCCAATGGAACTTTGTATTCCTTGTTGCACAAGAATGGTGGGGTGCTGGATTGGATGATGAGGTTCAGGATTGGATTAGGCGCAGCAAGGGGGCTTGCATGGCTGCACCATGGCTGCCACCCTCCCATCATACAGCAGAACATTTGCTCCAATGTCATTCTTGTTGATGAGGAGTTCGATGCTCGGTTGATGGACTTTGGGCTAGCAAGGCTCATGGCTTCAGACTCAAATGGTAGTTTTGTGAATGGAGATTTGGGGGAGATTGGTTACATCGCCCCGGAGTATCCAAGCACTTTGGTTGCTTCATTGAAAGGGGATGTGTATGGTTTTGGTGTTTTGCTTTTGGAGTTGGTGACAGGCCAAAAACCACTCTATGTGAGCAATGGGGAGGAAGATTTCAAGGGTAGCTTGGTGGATTGGGTGAACATGCATTCTAGTTTGGGAAGGATGAAGGATTGCATTGATAAAGCCATGAGTGGAAGAGGGCATGATGAGGAGATTCTTCAGTTTCTGAAAATTGCTTTGAATTGTGTGGTTTCTCGCCCCAAGGATAGGTGGTCTATGTACCAGGTTTATCATTCCTTAAAGGGGTTATCAAAAGACCAGAGTTTCTTTGAACATGATGATGACTTTCCCTTGATCTTTGGTAAGCCAGAAAACGAGGCAGCATAG 1821 0.4822 MDRRNTFSSSFLILTLLGFHVFLGSSQVEEDDVKCLRGIKEALSDPQGHLDLWRFENTTVGFICDFVGVTCWNQRENRVLSLDFQDFKLSGRIPEAMKYCGKSLQRLNLASNSFSFEIPHEICTWMPFLVSLDLSGNQLSGSIPPTLANCSYLNELMLSDNQLSGSIPFELGSLSRLKKFSVANNRLSGTIPEFFHGFEREGFEGNSGLCGGPLGSKCGGMSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLSGKRKKKGYGVGSTVGAAGDWALRLRGYKLVQVSLFQKPIVKVKLGDLMAATNNFSGENVLFATRTGTTYKADLPDGSTLAVKRLNACRIGEKQFGMEMNRLGQVRHPNLAPLLGYCVVEEEKLLVYKHMSNGTLYSLLHKNGGVLDWMMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARLMDFGLARLMASDSNGSFVNGDLGEIGYIAPEYPSTLVASLKGDVYGFGVLLLELVTGQKPLYVSNGEEDFKGSLVDWVNMHSSLGRMKDCIDKAMSGRGHDEEILQFLKIALNCVVSRPKDRWSMYQVYHSLKGLSKDQSFFEHDDDFPLIFGKPENEAA* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0267 606 ProSiteProfiles Protein kinase domain profile. 308 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0267 606 CDD STKc_IRAK 317 581 - -
Pvu4g0267 606 PANTHER RECEPTOR-LIKE PROTEIN 55 9 600 - -
Pvu4g0267 606 SUPERFAMILY L domain-like 30 200 - -
Pvu4g0267 606 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 600 - -
Pvu4g0267 606 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Pvu4g0267 606 Gene3D Ribonuclease Inhibitor 29 220 IPR032675 -
Pvu4g0267 606 Gene3D Transferase(Phosphotransferase) domain 1 383 599 - -
Pvu4g0267 606 SUPERFAMILY Protein kinase-like (PK-like) 285 578 IPR011009 -
Pvu4g0267 606 Pfam Protein tyrosine and serine/threonine kinase 329 576 IPR001245 GO:0004672|GO:0006468
Pvu4g0267 606 Gene3D Phosphorylase Kinase; domain 1 269 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0267 Pvu-Chr4 2453606 2456055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0267 11 604 Receptor kinase-like Gene Family AT3G28450 62.895 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Pvu4g0267 PK_Tyr_Ser-Thr 2.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0267 - - gmx:100810378 1046.57