Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0252 ATGGGTTTGAAGAGAGTGAGATGTTTTGTTTTTGGTTTGGTAGGTTTATTGATTATAGCAACAAAGGGAGAAGATGATGACAGTGATGATGTTGTGTACAGAGGGAAAGAATACTCAGCAATTTACAACTTTGGGGACTCAAATTCAGACACAGGAACATTTTCTGCAGCATTTGCAATGGTTTTTCCTCCCAATGGTGAAAACTTTCCACAAAAACTCCCTACAAGAAACTGTGATGGCCGACTCATCATTGATTTCATCTGTGAAGAGTTGAAGATGCCATACTTGAGTGCATATTTGGACTCCATTGGGTCAAATTTCAGTTATGGTGCAAACTTTGCAGCGGGTGGTTCATCCATAAAACAGACGGGCTTTAGCTCAATTACTTTTGGGCTTCAAATTTCTCAATTCATGCAGTTCAAGTCCAGGACAATGGCCCTCTACAATCAAACCTCTCACACCAGAGTAGATGCACCTTTCAAAAGTAGGTTACCCAAGTCCATGAACTTCTCCAATGCCCTATACACCATAGATATTGGTCAGAATGATCTAAGCTTTGGTTTCATGAGCTCAGATATAAATTCAATCAGATCAACAATCCCAGATATACTGAGCCAATTCTCTCTTGGATTGCAGCAACTTTTCAATGAAGGAGCCAGGTACTTCTGGATACATAACACAGGCCCAATTGGGTGTTTGCCACGAATGAACTTGATGAACAAGCTCACACCTGAAGACTTGGATTCTGCTGGATGTAGAAAAAATGAGAATGAGATTGCTCAGGAGTTTAACAAGCAACTTAAGGACACTGTGTTTGGGCTAAGGACAAAGTTAGCCAATGCCATCTTCACCTATGTTGATGTCTACTCAGCCAAATATGAACTGATAAAAAATGCAAGGAACCAAGGTTTTGTTAATCCTAAGAAGTTCTGCTGTGGAACAAGCAGTGGAATCCATGTTGACTGTGGAAAAAAGAAGATGAAAAATGGAAGAGAAGAATACTACAAATGTAAGCATCCATCAAAGTACATTAGTTGGGATGGTGTGCACTACTCTCAAGCAGCAAATCGATGGCTTTCCACTCTCATTTTGAATGCTTCTTTCTCTCATCCACCACTTCCTATAGGGATGCTTGCTTCTAAACCTCAAAAACAGAACTAA 1161 0.4014 MGLKRVRCFVFGLVGLLIIATKGEDDDSDDVVYRGKEYSAIYNFGDSNSDTGTFSAAFAMVFPPNGENFPQKLPTRNCDGRLIIDFICEELKMPYLSAYLDSIGSNFSYGANFAAGGSSIKQTGFSSITFGLQISQFMQFKSRTMALYNQTSHTRVDAPFKSRLPKSMNFSNALYTIDIGQNDLSFGFMSSDINSIRSTIPDILSQFSLGLQQLFNEGARYFWIHNTGPIGCLPRMNLMNKLTPEDLDSAGCRKNENEIAQEFNKQLKDTVFGLRTKLANAIFTYVDVYSAKYELIKNARNQGFVNPKKFCCGTSSGIHVDCGKKKMKNGREEYYKCKHPSKYISWDGVHYSQAANRWLSTLILNASFSHPPLPIGMLASKPQKQN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0252 386 CDD SGNH_plant_lipase_like 40 367 IPR035669 -
Pvu4g0252 386 Gene3D SGNH hydrolase 28 368 IPR036514 -
Pvu4g0252 386 SUPERFAMILY SGNH hydrolase 112 365 - -
Pvu4g0252 386 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 30 377 - -
Pvu4g0252 386 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN ISOFORM 1 30 377 - -
Pvu4g0252 386 Pfam GDSL-like Lipase/Acylhydrolase 41 361 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0252 Pvu-Chr4 2267501 2270372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0252 5 364 Pollen Coat Proteome AT1G75930 26.133 1.92e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0252 - - vra:106755556 607.446