LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu4g0250	ATGAATGATCTATTTAACAATACCACTTCCATTGGACTTAACAAAGCTCAAATGGATTTTGTTCAAAACTACCTCAATACCACTACCATTGCACTTCTTTCTCTAATCCTCTTTTGTTTATTCTTCTACAATCCCTTCAATTTTTTTCACACCAAAGAGGCTCCCACTGTTGCAGGAGCATGGCCAATACTTGGTCACCTTCCACTTCTGAGTGGTTCAAAGAGACCCCATAGAACTTTGGGTGCTTTGGCTGACAAATATGGACCCATTTTCACCATCCAACTTGGTGCCAAAAGGGCTTTGGTAATCAACAACTGGGAAACGGCAAAGGAATGTTTCACCACAAACGACATGGCCGTTTCCTCTCGCCCCAAGCTCATCGCGATTGAACTCATGGGCTACAATGCCATGTTTGGCTTTGTACCCTATGGTCCCTATTGGCGCGAGTTACGAAAGATTGTAACTTTAGAAATCCTTACTACTCGTCGAGTGGAACAACTGCAGCATGTTCGTGTCTCAGAACTTCAAAACTCGATCAAAGAGTTGCATAATGTTTGGTGTAGCCAAAAGAGAGAGTCTGGCTATGCCTTGGTGGAGCTGAAGCAATGGTTTTCTGACCTCTCATTCAACATGGTTCTTCGAATGGTCGTTGGGAAGAGATATTTTGGTGGTGAAAACTTGCAAGATGAGAAGACAAAGAGATGTGTGAAGGCTGTGGAGGAGTTCATGCGTCTGTTGGGGGTGTTCACAGTGGGAGATGCTGTTCCATGGTTGAGATGGTTTGATTTTGGAGGGCATGAGAAGGCAATGAAAGAAACTGCGAAAGAGTTGGATAGTATTATAGGTGAGGAGTTAGAGGAACATAGAAAAAGGAAGGGTTTGGGTGAGAAGGTTGATGAAGCTCAAGATTTCATGGATGTAATGATTTCATTGCTTGATGGAACAACTATTGATGGGATCGATGCAGATACCATGATCAAATCCACCCTACTGACAGTGATTGCAGGAGGAACTGACACAAGCAATACAGTTCTTATATGGACAATATCTTTGATTTTAAGAAATCCTTTGGTGTTGGAAAAAGTAAAAGAGGAACTAGATATTCATATTGGGAAAGAAAAATGCGTAAGGGAATATGATATAAGTAAGTTAACATATCTTCAAGCTATAGTAAAAGAAACTTTAAGATTGTATCCTCCTGTTCCTCTTTCGGTACCTCGTGAATTCATAAAAAATTGCACTTTGCAAGGCTACAATATAAACAAAGGAACCCGACTAATCACAAATCTTTGGAAGATTCATACAGATGGTAATGTTTGGGAAGATCCTTTGGAGTTCAAACCAGAAAGGTTTCTTACAACTCATAAAGATATTGACATCAAAGGCCATCATTTCGAGTTATTACCATTTGGAGGTGGCAGAAGAATGTGTCCAGGAGTATCCTTTGGACTTCAAATGGTGCATTTCATTCTTGCTAGTTTTTTGCATTCTTTTGAAATTTTAAGTTCATCACCTTATACTATAGACATGACTGAAACCTTTGGATTAACCAACACCAAAGCCACTCCACTTGATATTCTTATTAAACCGCGTCTATTTCTTAGTTGTTATGAAAACAACAAATCCTTGTATTAA	1635	0.3963	MNDLFNNTTSIGLNKAQMDFVQNYLNTTTIALLSLILFCLFFYNPFNFFHTKEAPTVAGAWPILGHLPLLSGSKRPHRTLGALADKYGPIFTIQLGAKRALVINNWETAKECFTTNDMAVSSRPKLIAIELMGYNAMFGFVPYGPYWRELRKIVTLEILTTRRVEQLQHVRVSELQNSIKELHNVWCSQKRESGYALVELKQWFSDLSFNMVLRMVVGKRYFGGENLQDEKTKRCVKAVEEFMRLLGVFTVGDAVPWLRWFDFGGHEKAMKETAKELDSIIGEELEEHRKRKGLGEKVDEAQDFMDVMISLLDGTTIDGIDADTMIKSTLLTVIAGGTDTSNTVLIWTISLILRNPLVLEKVKEELDIHIGKEKCVREYDISKLTYLQAIVKETLRLYPPVPLSVPREFIKNCTLQGYNINKGTRLITNLWKIHTDGNVWEDPLEFKPERFLTTHKDIDIKGHHFELLPFGGGRRMCPGVSFGLQMVHFILASFLHSFEILSSSPYTIDMTETFGLTNTKATPLDILIKPRLFLSCYENNKSLY*	545

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu4g0250	544	SUPERFAMILY	Cytochrome P450	60	531	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu4g0250	544	Gene3D	Cytochrome P450	50	533	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu4g0250	544	PRINTS	E-class P450 group I signature	84	103	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu4g0250	544	PRINTS	E-class P450 group I signature	108	129	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu4g0250	544	PRINTS	E-class P450 group I signature	207	225	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu4g0250	544	PRINTS	E-class P450 group I signature	325	342	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu4g0250	544	PRINTS	E-class P450 group I signature	345	371	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu4g0250	544	PRINTS	E-class P450 group I signature	388	406	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu4g0250	544	PRINTS	E-class P450 group I signature	429	453	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu4g0250	544	PRINTS	E-class P450 group I signature	467	477	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu4g0250	Pvu-Chr4	2252226	2254884	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu4g0250	25	532	Cytochrome P450	AT4G31970	47.490	2.17e-173	498

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu4g0250	-		-	gmx:100805047	786.563

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