Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0246 ATGGAGTTCGTTTTGGATTACCTTAATGGCAGTGCCATTGGTCTTCTTTCTCTAATCCTCTTGTATATGTTTCTCTATAATCCCTTCAAATTTTGTAAGGGAAAGAAGAAAGAGGCTCCCACAGTTGCAGGAGCATGGCCAATACTTGGTCACCTTCCACTGTTGAGTGGTTCAAAGACACCCCATAGAACTTTGGGTGCTTTGGCTGACAAATATGGACCCATTTTCACCATCCAACTTGGTTCCAAAAAGGCTTTGATAATCAACAACTGGGAAATAGCAAAGGAATGCTTCACCACAATCGACATGGTTGTTTCTTCTCGCCCCAAGATTCTCGCCTCTGAACTCATGGGCTACAACCATGCCATGTTTGGCTTTGCACCCTATGGTCCCTATTGGCGCGAGCTTCGAAAGATTACAACGTTAGAAATCCTTTCCCCTCGTCCAGTGGAACAACTGCAGCATGTTCGTGTCTCAGAACTTCAAAACTGGATCAAAGAGTTGTATGATGTTTGGTGTAGCCAAAAGAGTGAGTCTGGCTATGCCTTGGTGGAGCTGAAGCAATGGTTTTCTCACCTCGCATTCAACATGGTTCTTCGAATGGTCGTTGGGAAGAGACACTTTGGTGGTGAAAACTTAGAAGATGAGAAAGCACAGAGATATGTGAGGGCTGTGGAGGAGTTCATGCGCCTGTTCGGAGTGTTCACAGTGGGAGATGCTGTTCCATGGTTGAGATGGTTTGATTTTGGAGGGCATGAGAAGGCAATGAAAGAAACTGCGAAAGAGTTGGATAGTATTATAGGTGAGGAGTTAGAGGAACATAGAAAAAGGAAGGGTTTGGGTGAGAAGGTTGATGAAGCTCAAGATTTCATGGATGTAATGATTTCATTGTTTGATGGAACAACTATTGAAGGGATCGATGCAGATACCATGATCAAATCCACCCTACTGGCAGTGATTGTAGGAGGAATTGACACAAACAATACAATTCTTACATGGACAATATCTTTGATTTTAAGGAATCCTTTGGTGTTGGAAAACGTAAAAGATGAACTAGACACTCATATTGGAAAAGAGAAATGCGTAAATGAGTATGATATAAGTAAGTTAACATATCTTCAAGCCATAGTCAAAGAAACTTTAAGATTGTATCCTCCTACTCCTCTTTTTGGACCTCGTGAATTCACAGAGAATTGCACTTTAAGAGGCTATAATATAAAAAAGGGAACCCGACTAATCCCAAATCTTTGGAAGATTCACACAGATAGTAATGTTTGGGAAGACCCTTTGGAGTTCAAACCAGAAAGGTTTCTTACAACTCGTAAAGATATCGACGTCAAAGGTCATCATTTTGAACTATTACCATTTGGAGGTGGTAGAAGAATATGTCCAGCAGTATCCTTTGGCCTTCAAATGGTGCATTTCACTCTTGCTAGGTTTTTGCATTCCTTTGAAATTTTAAGTTCATCACCTGATCCTATTGACATGTCTGAAACATGTGGATTAACCAACACTAAAGCCACTCCACTCGATATTCTTATTAAACCACGTCTATCTCTTAGTTGTTATGAAAACAACCATTCCTTGTCTTAG 1593 0.4087 MEFVLDYLNGSAIGLLSLILLYMFLYNPFKFCKGKKKEAPTVAGAWPILGHLPLLSGSKTPHRTLGALADKYGPIFTIQLGSKKALIINNWEIAKECFTTIDMVVSSRPKILASELMGYNHAMFGFAPYGPYWRELRKITTLEILSPRPVEQLQHVRVSELQNWIKELYDVWCSQKSESGYALVELKQWFSHLAFNMVLRMVVGKRHFGGENLEDEKAQRYVRAVEEFMRLFGVFTVGDAVPWLRWFDFGGHEKAMKETAKELDSIIGEELEEHRKRKGLGEKVDEAQDFMDVMISLFDGTTIEGIDADTMIKSTLLAVIVGGIDTNNTILTWTISLILRNPLVLENVKDELDTHIGKEKCVNEYDISKLTYLQAIVKETLRLYPPTPLFGPREFTENCTLRGYNIKKGTRLIPNLWKIHTDSNVWEDPLEFKPERFLTTRKDIDVKGHHFELLPFGGGRRICPAVSFGLQMVHFTLARFLHSFEILSSSPDPIDMSETCGLTNTKATPLDILIKPRLSLSCYENNHSLS* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0246 530 SUPERFAMILY Cytochrome P450 45 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 Pfam Cytochrome P450 43 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Pvu4g0246 530 PANTHER CYTOCHROME P450 82C3-RELATED 9 524 - -
Pvu4g0246 530 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 Gene3D Cytochrome P450 30 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 PANTHER CYTOCHROME P450 82A2 9 524 - -
Pvu4g0246 530 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0246 530 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0246 Pvu-Chr4 2218869 2221173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0246 8 518 Cytochrome P450 AT4G31940 47.784 3.29e-174 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0246 - - gmx:100805047 808.135