Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0244 ATGGATTTGGTTGTAAATTCCTTGAATGCAACCACCATTGCACTCGCTTCTCTAATTCTCTTCTGTTTCTTTCTCTATGGTCTCTTCAAATTTTCTCGAGGGAAAGAACCTCCCACAGTTGCAGGTGCATGGCCAATACTTGGTCACCTTCCATTGATGAGTGGTTCAAAGTCACCCCACAGAACTTTGGGTGCTTTGGCCGACAAATATGGACCCATTTTCACCATCAAACTTGGTGCGAAAAGGGCTGTGGTAATCAACAACTGGGAAATAGCAAAGGAATGCTTCACCACAAACGACACAGTCGTTTTCGGTCGCCCCAAGCTTGTTTCGGTGGAACTCATGAGCTACAACCAAGCCATGTTTGCCTTAGCACCCTATGGTCCCTATTGGCGAAAAATAAGAAAGCTTACAATTTCAGAGATTCTCTCCCCTCAGCAAGTGAGGCAGCAACGTCATCTTTTTGAGTCAGAGGTTCAAGAATCGATCAAGGAGCTCTTTGACCTTTGGCGCAGCAACAAGAATGAGAGCGGCTATGCCTTGGTGGACTTGAAGCAATGGTTTTCTCATCTGATATTCAACATGGTCCTTCAAATGATTACAGGGAAGCGATATTTCAGTGCAGCAACTGTAGACGATGAGAAGGCACAGAGATGTGTGAGGACTGTGGAGGAGTTGATGCGTCTGATGGGGGTGTTCACAGTGGGAGACGCTGTTCCTTGGTTGAGACGGTTTGATTTGGGAGGGAATGAGAAGGCTATGAAAGAAATTGCTAAAGAGTTGGATATTATTCTTGGTGAGGAGTTAGAGGAACACAGAAAAAGGAAGGGTTTGGGTGAAGCTAAAGATTTCATTGATGTGATGATTTCCTTGTTTGATGGAACAATTACTGATGGGGTCGATGCAGATACCGTTATCAAATCCACCATACTGACACTGATTGCAGGAGGAACTGACACAAGTAGTGTTGTTCTTGTGTGGGCAATGTGTTTGATTTTGGGAAATCCTTTGGTATTGGAAAAAGTGCAAGCCGAACTAGACATTCATATTGGAAAAGAGAAATGCGTAAGTGAGTCTGATATGAGTAAGTTAACATATCTTCAAGCCATAGTCAAAGAAACTTTAAGATTATATCCTCCGGGTCCTCTTGCGACACCTCGTGAATTCACAGAGAATTGCACTTTAGGTGGTTATAATATAAAAAAAGGAACTCGACTAATCACAAATCTTTGGAAGATTCACACAGACAAGAATGTTTGGGAAGATCCATTGGAGTTCAAACCTGAAAGGTTTCTTACAACTTACAAAGATCTCGATGTTAAAGGTCATCATTTTGAGCTAATACCATTTGGAGGTGGTAGAAGAATGTGTCCAGGAATATCCTTTGGCCTTGAAGTAGTGCAATTCTCTCTTGCTAGTATTTTGCACTCTTTTGAATTTTTAAGTTCATCACCTGATCCTATTGACATGACCGAAAACTTTGGATTAGCCAACACCAAAGCCACTCCACTTGAGATTCTTATTAAACCACACCTATCTTTTAGTTGTTATGAAAACAACTAA 1563 0.4178 MDLVVNSLNATTIALASLILFCFFLYGLFKFSRGKEPPTVAGAWPILGHLPLMSGSKSPHRTLGALADKYGPIFTIKLGAKRAVVINNWEIAKECFTTNDTVVFGRPKLVSVELMSYNQAMFALAPYGPYWRKIRKLTISEILSPQQVRQQRHLFESEVQESIKELFDLWRSNKNESGYALVDLKQWFSHLIFNMVLQMITGKRYFSAATVDDEKAQRCVRTVEELMRLMGVFTVGDAVPWLRRFDLGGNEKAMKEIAKELDIILGEELEEHRKRKGLGEAKDFIDVMISLFDGTITDGVDADTVIKSTILTLIAGGTDTSSVVLVWAMCLILGNPLVLEKVQAELDIHIGKEKCVSESDMSKLTYLQAIVKETLRLYPPGPLATPREFTENCTLGGYNIKKGTRLITNLWKIHTDKNVWEDPLEFKPERFLTTYKDLDVKGHHFELIPFGGGRRMCPGISFGLEVVQFSLASILHSFEFLSSSPDPIDMTENFGLANTKATPLEILIKPHLSFSCYENN* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0244 520 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PANTHER CYTOCHROME P450 82A2 1 518 - -
Pvu4g0244 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Pvu4g0244 520 PANTHER CYTOCHROME P450 82C3-RELATED 1 518 - -
Pvu4g0244 520 Pfam Cytochrome P450 41 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 Gene3D Cytochrome P450 30 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0244 520 SUPERFAMILY Cytochrome P450 38 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0244 Pvu-Chr4 2203479 2206274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0244 38 512 Cytochrome P450 AT4G31940 46.407 2.73e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0244 - - gmx:100805047 757.673