Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0242 ATGGACTTTCTCCTAAATTGCTTCACCTTAAAAATCACCACTCTTATTGTATCCTTCCTTTCTCTATACTTCTTCATTTTCTATCTATATCGGAGAAATTCTCGTGGAAAACAGGCTCCAATAGTGAAAGGTGCATGGCCAATACTTGGTCATCTTTCACTCTTGAATGCCTCACAAACACCCCATTGGACTTTGGGTGCTTTGGCTGACAACTATGGACCCTTGTTCACCATCAAGTTCGGTGTCAAAGAGGCCTTGGTGCTCAGCAACTGGGAAATGTCCAGGGAACTCTTCACCACCAACGACCTTGCCGTTTCATCACGTCCTAAACTCGTTGCCGTGGAAGTCATGTCCTACAACCAAGCCTTTGTAGGGTTGTCACCATACGGATCTTATTGGCGAGAGCTTCGAAAGATTGTGACTTCTGAGTTTCTCTCCAACCGCAAAATAGCGCAACTCAGCCACATTCGTGTCTCAGAGGTTCAAACCTCTATGAAAGAGCTCTGCAATTTATGTTATACTAGTGTAAACAACAAGAACAAAAAGGAGAATGAATCTTATAGTGCTGCTACTTTGGTGGACATGAAGGAGTGGTTTGCACATTTGACTTTCAACATTATAGTGAGGATGGTGGTGGGGAAGAGGTACTTTGGTGTGGTGCATGTGGAGGGAAAGGAGAAGGCAGAAAGGTTTCTGAAGAACTTAGAGGAGTTCATGAATTTGATGGGGACTTTCACTGTGGCTGATGGAGTTCCTTGCTTGAGGTGGTTTGATTTCGGGGGCTATGAGAAGGCCATGAAAGCAACCGCTAAGGAAATGGACAAGCTGTTGAGTGAGTGGTTGGAGGAGCACCGTGAGAAGAAGGGTGATGGAGACTTTATGGATGTGATGATTTCAGCACTGAATGGGGCTCAGCTTGAAGGGTTTGATGCTGATACAATATGCAAAGCCACTTCCCTGGAATTGATTTTGGGTGGAACTGATACAGCTGCTGTTACTCTTACATGGGCACTAAGTCTGCTATTACGAAATCCTCTTGCAATGGAAAAGGCTAAAGAAGAAATTGACATGCATATTGGCAAAGATGGACACGTAAAAGAGTCAGATATAAGCAAACTTGTGTATCTTCAAGCCGTAGTTAAAGAGACATTGAGATTGTATCCACCAGCACCTCTTTCATCACCTCGTGAATTCATAGAAAATTGCACCTTAGGTGGCTACCACATCAAAAAGGGAACTCGACTGATGCATAACTTGTGGAAGATCCACAGAGACCCCAGTGTTTGGTCAGATCCATTAGAATTCAAACCAGAAAGGTTCCTCACCACTCACAAACATGTGGATCTTAGGGGTCGCCATTTTGAGTTGCTACCCTTTGGAAGTGGGAGAAGAATTTGTGCTGGAATGTCCCTTGGCTTAAACGTGATCCATTTCAGTTTGGCTAACATGTTGCATTGCTTTGACATCTCGAATCCTTCGGCTGAACCTATTGATATGACCGAGTTCTTTGGATTTACCAATACCAGAGCTACTCCACTTGAGGTTTTGGTTAAGCCACGCCTATCTCCAAACTACTATGAAGCTTTATAA 1590 0.4377 MDFLLNCFTLKITTLIVSFLSLYFFIFYLYRRNSRGKQAPIVKGAWPILGHLSLLNASQTPHWTLGALADNYGPLFTIKFGVKEALVLSNWEMSRELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLSPYGSYWRELRKIVTSEFLSNRKIAQLSHIRVSEVQTSMKELCNLCYTSVNNKNKKENESYSAATLVDMKEWFAHLTFNIIVRMVVGKRYFGVVHVEGKEKAERFLKNLEEFMNLMGTFTVADGVPCLRWFDFGGYEKAMKATAKEMDKLLSEWLEEHREKKGDGDFMDVMISALNGAQLEGFDADTICKATSLELILGGTDTAAVTLTWALSLLLRNPLAMEKAKEEIDMHIGKDGHVKESDISKLVYLQAVVKETLRLYPPAPLSSPREFIENCTLGGYHIKKGTRLMHNLWKIHRDPSVWSDPLEFKPERFLTTHKHVDLRGRHFELLPFGSGRRICAGMSLGLNVIHFSLANMLHCFDISNPSAEPIDMTEFFGFTNTRATPLEVLVKPRLSPNYYEAL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0242 529 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PANTHER CYTOCHROME P450 82A3 11 528 - -
Pvu4g0242 529 Gene3D Cytochrome P450 30 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 SUPERFAMILY Cytochrome P450 45 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 Pfam Cytochrome P450 45 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Pvu4g0242 529 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0242 529 PANTHER CYTOCHROME P450 82C3-RELATED 11 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0242 Pvu-Chr4 2190804 2192766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0242 14 526 Cytochrome P450 AT4G31940 46.490 5.36e-171 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0242 - K23136 gmx:100789386 848.195