Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0234 ATGGCTTCAGGTGGAACCGAAACTTTTCCAGATTTGGGTAAAAACTGCCAGCACCGCGACTGCAACCACCTCGATTTTCTTCCTTACATCTGCGACGGTTGCCAACGAGTGTTTTGTTCGGAGCACAGATCTTACAAGTCTCACGCGTGCGCGAAATCTAACCTAAGCAGAAAGGTGATTGTTTGCCAAACATGTTCCATGTCCATTGAGACCACCGGCTACGTGGGACAAGACGAAGATGCAATCTTGGAGAAGCACCACAAGTCTGGGAACTGTGATCCCACCAACAAGAAGAAGAAAACCATTTGCCCTGTCAAGGGGTGCAAGGAGATTTTATCAATATCCAACACCAGCACATGTAAAACTTGCCACCTGAAGGTGTGCCTCAAACACCGTTTTCCTTCTGATCATGCTTGTAGCAGAGGAGTTTCAGCTTCTGCTTCAGCTTCTGCTGCTGATGGTGGGTGGAAGAATTTTCTTAGCTGCTTTTGTTTCAAAACAGAACAACAGAAAAGGCCATAA 522 0.4655 MASGGTETFPDLGKNCQHRDCNHLDFLPYICDGCQRVFCSEHRSYKSHACAKSNLSRKVIVCQTCSMSIETTGYVGQDEDAILEKHHKSGNCDPTNKKKKTICPVKGCKEILSISNTSTCKTCHLKVCLKHRFPSDHACSRGVSASASASAADGGWKNFLSCFCFKTEQQKRP* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0234 173 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Pvu4g0234 173 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Pvu4g0234 173 SUPERFAMILY AN1-like Zinc finger 95 147 IPR035896 -
Pvu4g0234 173 SUPERFAMILY AN1-like Zinc finger 6 52 IPR035896 -
Pvu4g0234 173 Gene3D - 79 156 IPR035896 -
Pvu4g0234 173 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 6 146 - -
Pvu4g0234 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 6 146 - -
Pvu4g0234 173 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Pvu4g0234 173 SMART AN1_Zf_4 16 57 IPR000058 GO:0008270
Pvu4g0234 173 Gene3D - 2 64 IPR035896 -
Pvu4g0234 173 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Pvu4g0234 173 Pfam AN1-like Zinc finger 103 140 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0234 Pvu-Chr4 2115124 2116349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0234 1 151 C2H2 Transcription Factor Family AT3G28210 59.868 4.91e-61 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0234 - - pvu:PHAVU_004G020400g 363.614